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scnpilot_p_inoc_scaffold_266_curated

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_266_curated_1
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..124
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HHR5_RHOCA
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADE87287.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).;"
scnpilot_p_inoc_scaffold_266_curated_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(778..1095)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BXR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD85888.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
conserved exported protein of unknown function
scnpilot_p_inoc_scaffold_266_curated_3
unknown

Not on your lists

comp(1246..3150)
DNA (1905bp) protein (635aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_266_curated_4
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3316..4242)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VT4_STIAD
hypothetical protein
Tax=CG_Mariprof_01
scnpilot_p_inoc_scaffold_266_curated_5
unknown

Not on your lists

comp(4310..4450)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_266_curated_6
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4703..5902
DNA (1200bp) protein (400aa)
ParB domain protein nuclease n=2 Tax=Oligotropha carboxidovorans RepID=B6J9U9_OLICO
Plasmid stablization protein ParB {ECO:0000313|EMBL:KGJ05249.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
ParB-like domain protein; K03497 chromosome partitioning protein, ParB family
scnpilot_p_inoc_scaffold_266_curated_7
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6104..6502
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ELA0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGJ05248.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6580..6834
DNA (255bp) protein (85aa)
Putative plasmid stability protein y4jJ n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK28_9RHIZ
VapB protein (Antitoxin to VapC) {ECO:0000313|EMBL:EXJ15306.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_9
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6831..7253
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
Ribonuclease VapC n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKN5_9RHIZ
PilT domain-containing protein; K07062
scnpilot_p_inoc_scaffold_266_curated_10
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8026..8343
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036E6369
Uncharacterized protein {ECO:0000313|EMBL:KCZ50365.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_11
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8744..9850
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9U4_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KGJ05243.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_12
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10131..10352
DNA (222bp) protein (74aa)
Conjugal transfer protein TrbC n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID57_XANP2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KGJ05223.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
scnpilot_p_inoc_scaffold_266_curated_13
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10373..10759
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:AJE46467.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
Transcriptional regulator id=2927351 bin=GWF1_Rhodobacteraceae_65_7 species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_14
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10756..12507
DNA (1752bp) protein (584aa)
Site-specific recombinase {ECO:0000313|EMBL:AJE47018.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
Resolvase id=2927347 bin=GWF1_Rhodobacteraceae_65_7 species=Oceanicaulis sp. HTCC2633 genus=Oceanicaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Site-specific recombinase
scnpilot_p_inoc_scaffold_266_curated_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12719..13045
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4K1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW24084.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_16
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13023..14336
DNA (1314bp) protein (438aa)
Terminase protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K9M8_9RHOB
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_p_inoc_scaffold_266_curated_17
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14438..15613
DNA (1176bp) protein (392aa)
Phage portal protein, HK97 family id=2972302 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
portal protein
Tax=CG_Rhodob_01
scnpilot_p_inoc_scaffold_266_curated_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15610..15858
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B32B38
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_266_curated_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15864..16436
DNA (573bp) protein (191aa)
primosome assembly protein PriA n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B2E9A1
HK97 family phage prohead protease; K06904
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_266_curated_20
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16471..17670
DNA (1200bp) protein (400aa)
capsid protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5B6C5
Capsid protein {ECO:0000313|EMBL:KDB03408.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
phage phi-C31 gp36 major capsid-like protein
scnpilot_p_inoc_scaffold_266_curated_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17819..18418
DNA (600bp) protein (200aa)
Putative uncharacterized protein id=2756119 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_266_curated_22
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18466..18753
DNA (288bp) protein (96aa)
Putative phage head-tail adaptor id=2756118 bin=GWF1_Rhodobacteraceae_65_7 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
phage tail-head adaptor
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_266_curated_23
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18750..19142
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=2756117 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_266_curated_24
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19217..19630
DNA (414bp) protein (138aa)
Phage major tail protein, TP901-1 family id=2756116 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
phage major tail protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_266_curated_25
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19633..19953
DNA (321bp) protein (107aa)
Gene transfer agent protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EHH1_9RHOB
Gene transfer agent protein {ECO:0000313|EMBL:ESW60561.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_26
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19950..20168
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY47_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX10448.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
hypothetical protein
scnpilot_p_inoc_scaffold_266_curated_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20146..20799
DNA (654bp) protein (218aa)
tail protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5A04D
phage tail minor protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_266_curated_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20809..21441
DNA (633bp) protein (211aa)
Putative uncharacterized protein id=2756113 bin=GWF1_Rhodobacteraceae_65_7 species=Maritimibacter alkaliphilus genus=Maritimibacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_266_curated_29
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21438..22328
DNA (891bp) protein (297aa)
Putative uncharacterized protein id=2756112 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius nubinhibens genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_266_curated_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22325..22774
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=2756111 bin=GWF1_Rhodobacteraceae_65_7 species=Pelagibaca bermudensis genus=Pelagibaca taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
NlpC/P60 family phage cell wall peptidase
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying items 1-30 of 129 in total

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