name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_706_curated_1
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
140..814
|
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025575B0
LysR family transcriptional regulator {ECO:0000313|EMBL:KFE48182.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
LysR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_706_curated_2
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1443..2702)
|
Putative glycerate kinase {ECO:0000313|EMBL:KGM89229.1}; EC=1.1.1.81 {ECO:0000313|EMBL:KGM89229.1};; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
hydroxypyruvate reductase (EC:1.1.1.81)
Probable hydroxypyruvate reductase oxidoreductase protein n=1 Tax=Roseovarius sp. 217 RepID=A3W5P7_9RHOB
|
|
scnpilot_p_inoc_scaffold_706_curated_3
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3145..4458)
|
UPI0003D1A9AB related cluster n=1 Tax=unknown RepID=UPI0003D1A9AB
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49650.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
TRAP dicarboxylate transporter subunit DctM
|
|
scnpilot_p_inoc_scaffold_706_curated_4
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4480..5055)
|
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FPK1_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU46212.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
TRAP transport system, small permease
|
|
scnpilot_p_inoc_scaffold_706_curated_5
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5052..6044)
|
UPI0003D1ADEA related cluster n=1 Tax=unknown RepID=UPI0003D1ADEA
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49652.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
TRAP transport system substrate-binding protein
|
|
scnpilot_p_inoc_scaffold_706_curated_6
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6115..7836)
|
hyuB; hydantoin utilization protein; K01474 N-methylhydantoinase B [EC:3.5.2.14]
UPI0003D1A3BC related cluster n=1 Tax=unknown RepID=UPI0003D1A3BC
N-methylhydantoinase B {ECO:0000313|EMBL:EAU48290.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
|
|
scnpilot_p_inoc_scaffold_706_curated_7
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7833..9887)
|
hyuA; hydantoin utilization protein; K01473 N-methylhydantoinase A [EC:3.5.2.14]
UPI0003D1A8D4 related cluster n=1 Tax=unknown RepID=UPI0003D1A8D4
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49654.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
|
|
scnpilot_p_inoc_scaffold_706_curated_8
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10034..10759
|
Putative transcriptional regulator protein, AsnC/GntR family n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FXB0_PELBH
Putative transcriptional regulator protein, AsnC/GntR family {ECO:0000313|EMBL:EAU48292.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
GntR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_706_curated_9
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11102..11419)
|
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y7Y4_PARAH
Trans-acting regulatory protein hvrA {ECO:0000313|EMBL:KFI24541.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
histone family protein nucleoid-structuring protein H-NS
|
|
scnpilot_p_inoc_scaffold_706_curated_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11728..12837)
|
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
rbh
histidinol-phosphate aminotransferase id=2813727 bin=GWF1_Rhodobacteraceae_65_7 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_11
Paracoccus yeei, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12851..14242)
|
FAD linked oxidase-like protein id=2813723 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
D-lactate dehydrogenase {ECO:0000313|EMBL:AJW30101.1}; TaxID=147645 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus yeei.;"
FAD linked oxidase-like protein
|
|
scnpilot_p_inoc_scaffold_706_curated_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14342..15898)
|
Peptide ABC transporter, periplasmic peptide-binding protein id=2813719 bin=GWF1_Rhodobacteraceae_65_7 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
ABC-type dipeptide transport system, periplasmic component
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_13
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16090..17022
|
LysR substrate-binding protein id=2813715 bin=GWF1_Rhodobacteraceae_65_7 species=Mesorhizobium ciceri genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
LysR family transcriptional regulator
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17107..18147
|
van; vanillate O-demethylase oxygenase; K03862 vanillate monooxygenase [EC:1.14.13.82]
Vanillate O-demethylase oxygenase-like protein id=2813712 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_15
Paracoccus yeei, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18151..19332
|
phthalate 4,5-dioxygenase (EC:1.14.12.7)
Flavohemoprotein-like protein, oxidoreductase {ECO:0000313|EMBL:AJW30105.1}; TaxID=147645 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus yeei.;"
Oxidoreductase FAD/NAD(P)-binding domain-containing protein id=2514706 bin=GWF1_Rhodobacteraceae_65_7 species=Alcaligenes sp. HPC1271 genus=Alcaligenes taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
|
|
scnpilot_p_inoc_scaffold_706_curated_16
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19405..21021)
|
ABC transporter related protein id=2514699 bin=GWF1_Rhodobacteraceae_65_7 species=Sagittula stellata genus=Sagittula taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
ABC transporter-like protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_17
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21025..21882)
|
Peptide ABC transporter, permease protein id=2514694 bin=GWF1_Rhodobacteraceae_65_7 species=Marinomonas sp. MED121 genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
dppC2; dipeptide transport system permease protein DppC
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21887..22855)
|
Uncharacterized protein id=2514691 bin=GWF1_Rhodobacteraceae_65_7 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23015..23698
|
Histidine utilization repressor id=2514685 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius nubinhibens genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hutC; histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_20
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23887..24381)
|
AsnC family transcriptional regulator n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AIT2_BURGB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ACR31812.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
|
|
scnpilot_p_inoc_scaffold_706_curated_21
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24531..25571
|
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AIT1_BURGB
Alcohol dehydrogenase {ECO:0000313|EMBL:ACR31811.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
|
|
scnpilot_p_inoc_scaffold_706_curated_22
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25729..26313
|
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVM8_RUEPO
hypothetical protein; K14160 protein ImuA
Uncharacterized protein {ECO:0000313|EMBL:AAV93980.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
|
|
scnpilot_p_inoc_scaffold_706_curated_23
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26255..27709
|
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SRD9_9RHOB
Nucleotidyltransferase {ECO:0000313|EMBL:KGJ04258.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
protein imuB-like protein
|
|
scnpilot_p_inoc_scaffold_706_curated_24
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27706..31011
|
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7]
Error-prone DNA polymerase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=DNAE2_RUEPO
rbh
|
|
scnpilot_p_inoc_scaffold_706_curated_25
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31355..31852
|
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00031D0419
Spore coat protein U {ECO:0000313|EMBL:KIX17588.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
spore coat protein U
|
|
scnpilot_p_inoc_scaffold_706_curated_26
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31867..32580
|
P pilus assembly protein, chaperone PapD n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IPI2_RHIML
Uncharacterized protein {ECO:0000313|EMBL:KIX17587.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
P pilus assembly protein, chaperone PapD
|
|
scnpilot_p_inoc_scaffold_706_curated_27
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32558..34948
|
Fimbrial biogenesis outer membrane usher protein n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EE69_SINMK
Uncharacterized protein {ECO:0000313|EMBL:KIX17586.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
fimbrial biogenesis outer membrane usher protein; K07347 outer membrane usher protein
|
|
scnpilot_p_inoc_scaffold_706_curated_28
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34945..35916
|
Spore coat protein U n=1 Tax=Nitratireductor indicus C115 RepID=K2NP20_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIX17585.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
spore coat protein u
|
|
scnpilot_p_inoc_scaffold_706_curated_29
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36316..37152
|
Diaminopimelate epimerase id=2742646 bin=GWF1_Xanthomonadales_69_6 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
|
|
scnpilot_p_inoc_scaffold_706_curated_30
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37149..38402
|
2-methylthioadenine synthase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL60_9RHOB
2-methylthioadenine synthase {ECO:0000313|EMBL:ESW61841.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
MiaB-like tRNA modifying enzyme
|