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scnpilot_p_inoc_scaffold_36_curated

Search features with annotation key words

Displaying items 1-30 of 373 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_36_curated_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..285
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036705ED
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
scnpilot_p_inoc_scaffold_36_curated_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(710..880)
DNA (171bp) protein (57aa)
DNA gyrase inhibitor YacG n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H9V4_RHOCA
hypothetical protein; K09862 hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_3
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(877..1929)
DNA (1053bp) protein (351aa)
ribonuclease G and E-like protein; K01128 [EC:3.1.4.-]
Ribonuclease n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYI3_9RHOB
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1926..2504)
DNA (579bp) protein (193aa)
Maf-like protein Rsph17029_2277 n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PM13_RHOS1
maf protein; K06287 septum formation protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2501..2719)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYI1_9RHOB
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2822..3703)
DNA (882bp) protein (294aa)
amidohydrolase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B716BF
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_7
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3732..4316)
DNA (585bp) protein (195aa)
GNAT family acetyltransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B2F850
GNAT family acetyltransferase {ECO:0000313|EMBL:ESW60231.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_36_curated_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4313..4711)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WQ38_RHOS5
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_9
unknown

Not on your lists

4975..5223
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_36_curated_10
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5433..6317
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B6C5D0
Uncharacterized protein {ECO:0000313|EMBL:KIX17993.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_36_curated_11
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6289..6708)
DNA (420bp) protein (140aa)
ArsC family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGW1_9RHOB
ArsC family transcriptional regulator {ECO:0000313|EMBL:ESW60233.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_36_curated_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..7268)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B37BD2
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_13
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..8661)
DNA (1302bp) protein (434aa)
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KL49_RHOSK
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8793..9269)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QVM0_9RHOB
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9269..10537)
DNA (1269bp) protein (423aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJB1_9RHOB
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11074..12027)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B67BDC
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_36_curated_17
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12274..13641
DNA (1368bp) protein (456aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
DEAD/DEAH box helicase domain protein id=2652690 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_18
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13700..14155)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S3E2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW24507.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_36_curated_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14581..15231
DNA (651bp) protein (217aa)
thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase id=2652692 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_20
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15228..16166)
DNA (939bp) protein (313aa)
Putative uncharacterized protein id=2652694 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
drug/metabolite exporter (DME) family protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_21
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16267..17916
DNA (1650bp) protein (550aa)
AMP-dependent synthetase and ligase id=2652696 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
AMP-dependent synthetase and ligase
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_22
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17913..18407
DNA (495bp) protein (165aa)
acetyltransferase (EC:2.3.1.-); K03824 putative acetyltransferase [EC:2.3.1.-]
GCN5-related N-acetyltransferase id=2652701 bin=GWF1_Rhodobacteraceae_65_7 species=Roseobacter sp. SK209-2-6 genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_23
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18475..19500
DNA (1026bp) protein (342aa)
Putative uncharacterized protein id=2652704 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_24
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19577..20857)
DNA (1281bp) protein (427aa)
Sporulation domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S3E6_9RHOB
Sporulation domain protein {ECO:0000313|EMBL:EEW24511.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_36_curated_25
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20923..21555)
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S3E7_9RHOB
scnpilot_p_inoc_scaffold_36_curated_26
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21552..22541)
DNA (990bp) protein (330aa)
add; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase id=2652708 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_27
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22538..23734)
DNA (1197bp) protein (399aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7]
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
Phosphopentomutase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PGA2_RHOS1
scnpilot_p_inoc_scaffold_36_curated_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23731..25044)
DNA (1314bp) protein (438aa)
deoA; thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4]
Thymidine phosphorylase id=2669734 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_36_curated_29
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25041..25448)
DNA (408bp) protein (136aa)
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase {ECO:0000313|EMBL:ABP69185.1}; EC=3.5.4.5 {ECO:0000313|EMBL:ABP69185.1};; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
Cytidine deaminase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WP71_RHOS5
scnpilot_p_inoc_scaffold_36_curated_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25695..27974
DNA (2280bp) protein (760aa)
malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase id=2626438 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying items 1-30 of 373 in total

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