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scnpilot_p_inoc_scaffold_1598_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1598_curated_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..319
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036705ED
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
scnpilot_p_inoc_scaffold_1598_curated_2
unknown

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973..1191
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1598_curated_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1422..2747
DNA (1326bp) protein (442aa)
DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417, ECO:0000313|EMBL:CCA91331.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Cytosine-specific methyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IH80_9SPHN
scnpilot_p_inoc_scaffold_1598_curated_4
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2719..3525
DNA (807bp) protein (269aa)
Endonuclease n=1 Tax=Acidocella facilis RepID=Q762K1_ACIFA
Uncharacterized protein {ECO:0000313|EMBL:GAK34520.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
endonuclease
scnpilot_p_inoc_scaffold_1598_curated_5
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3670..4491
DNA (822bp) protein (274aa)
UPI0003CFB48E related cluster n=1 Tax=unknown RepID=UPI0003CFB48E
Uncharacterized protein {ECO:0000313|EMBL:ESZ22827.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
putative restriction endonuclease
scnpilot_p_inoc_scaffold_1598_curated_6
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4851..8927)
DNA (4077bp) protein (1359aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XNV3_HIRBI
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ACT58356.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
XRE family plasmid maintenance system antidote protein
scnpilot_p_inoc_scaffold_1598_curated_7
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9162..9989)
DNA (828bp) protein (276aa)
D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72]
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U1U4_RHOSH
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_1598_curated_8

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comp(10079..10546)
DNA (468bp) protein (156aa)
putative phage repressor n=1 Tax=Oceanicola sp. S124 RepID=UPI00025582BB
Phage repressor {ECO:0000313|EMBL:AGH57967.1}; TaxID=754056 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Rhodovulum phage RS1.;"
putative phage repressor
scnpilot_p_inoc_scaffold_1598_curated_9
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10883..11128
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VYF5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS43382.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
scnpilot_p_inoc_scaffold_1598_curated_10
unknown

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11128..11385
DNA (258bp) protein (86aa)
id=2484052 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
scnpilot_p_inoc_scaffold_1598_curated_11
unknown

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11382..11633
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1598_curated_12
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11638..11961
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HB84_RHOCA
Putative uncharacterized protein {ECO:0000313|EMBL:EEX13953.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
scnpilot_p_inoc_scaffold_1598_curated_13
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12004..12891
DNA (888bp) protein (296aa)
ParB domain protein nuclease id=2484043 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
nuclease
ParB domain protein nuclease {ECO:0000313|EMBL:ABP70179.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
scnpilot_p_inoc_scaffold_1598_curated_14
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12888..15005
DNA (2118bp) protein (706aa)
Integrase, catalytic region n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WS16_RHOS5
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABP70180.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
scnpilot_p_inoc_scaffold_1598_curated_15
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15015..15815
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WS17_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP70181.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
scnpilot_p_inoc_scaffold_1598_curated_16
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15818..16396
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WS18_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP70182.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
scnpilot_p_inoc_scaffold_1598_curated_17
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16393..16782
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U1V7_RHOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP70183.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
scnpilot_p_inoc_scaffold_1598_curated_18
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16848..17510
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HCK5_RHOCA
Uncharacterized protein {ECO:0000313|EMBL:EBA16385.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1598_curated_19
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17512..17961
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=2483921 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP70187.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
scnpilot_p_inoc_scaffold_1598_curated_20
unknown

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17958..18224
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HCH1_RHOCA
scnpilot_p_inoc_scaffold_1598_curated_21
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18221..18472
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WS26_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP70190.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
Displaying 21 items

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