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scnpilot_p_inoc_scaffold_591_curated

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_591_curated_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197..1504)
DNA (1308bp) protein (436aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EP80_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1535..2863)
DNA (1329bp) protein (443aa)
Glutamate synthase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELX9_9RHOB
Glutamate synthase {ECO:0000313|EMBL:ESW62043.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
glutamate synthase-like protein
scnpilot_p_inoc_scaffold_591_curated_3
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2873..3562)
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=2918244 bin=GWF1_Rhodobacteraceae_65_7 species=Roseobacter litoralis genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_4
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3565..4461)
DNA (897bp) protein (299aa)
Glutamine amidotransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELR3_9RHOB
Glutamine amidotransferase {ECO:0000313|EMBL:ESW62041.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
glutamine amidotransferase class-II
scnpilot_p_inoc_scaffold_591_curated_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4762..5052
DNA (291bp) protein (97aa)
Membrane protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPX3_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5056..5433
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003674F80
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_7
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5437..5607
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00035E7640
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11441.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
scnpilot_p_inoc_scaffold_591_curated_8
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5609..7003
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y1U8_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11442.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
scnpilot_p_inoc_scaffold_591_curated_9
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7003..7680
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037394AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11443.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
scnpilot_p_inoc_scaffold_591_curated_10
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7671..7988
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00035DD234
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11444.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
scnpilot_p_inoc_scaffold_591_curated_11
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8268..9950
DNA (1683bp) protein (561aa)
Amino acid permease-associated protein id=2996771 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
amino acid transporter, permease protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_12

Not on your lists

10136..11275
DNA (1140bp) protein (380aa)
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BI93_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD61779.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_591_curated_13
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11380..11988
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPL4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW62097.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_591_curated_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11985..12950
DNA (966bp) protein (322aa)
ferredoxin (EC:1.14.13.-)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A120_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_15

Not on your lists

12960..14009
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AJ86_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD61776.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_591_curated_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14017..14715)
DNA (699bp) protein (233aa)
DNA-binding protein id=2918246 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacterales bacterium Y4I genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
transcriptional regulator protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15800
DNA (1008bp) protein (336aa)
AraC family transcriptional regulator (EC:1.6.99.3)
Transcriptional regulator, AraC family id=2918247 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacterales bacterium Y4I genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15918..16307)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YIU6_PARAH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16313..18679)
DNA (2367bp) protein (789aa)
glycine cleavage system T protein (aminomethyltransferase) (EC:2.1.2.10)
UPI0003D6A969 related cluster n=1 Tax=unknown RepID=UPI0003D6A969
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18802..19650
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELZ9_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_21
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19745..21007
DNA (1263bp) protein (421aa)
sarcosine oxidase subunit beta (EC:1.5.3.1); K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]
Sarcosine oxidase subunit beta n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPW3_9RHOB
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:ESW62030.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
scnpilot_p_inoc_scaffold_591_curated_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21018..21305
DNA (288bp) protein (96aa)
sarcosine oxidase, delta subunit, heterotetrameric; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
Sarcosine oxidase subunit delta n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELQ3_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_591_curated_23
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21302..24211
DNA (2910bp) protein (970aa)
Sarcosine oxidase, alpha subunit family, heterotetrameric form {ECO:0000313|EMBL:EPX83760.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EPX83760.1};; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
sarcosine oxidase subunit alpha; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Sarcosine oxidase, alpha subunit family, heterotetrameric form n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S0K4_9RHOB
scnpilot_p_inoc_scaffold_591_curated_24
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24204..24770
DNA (567bp) protein (189aa)
sarcosine oxidase subunit gamma; K00305 sarcosine oxidase, subunit gamma [EC:1.5.3.1]
Sarcosine oxidase subunit gamma n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELW7_9RHOB
Sarcosine oxidase subunit gamma {ECO:0000313|EMBL:ESW62033.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
scnpilot_p_inoc_scaffold_591_curated_25
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24835..25602)
DNA (768bp) protein (256aa)
cobF; precorrin-6A synthase CobF (EC:2.1.1.152); K02228 precorrin-6A synthase [EC:2.1.1.152]
Precorrin-6A synthase (Deacetylating) id=2492613 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_26
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25654..26331)
DNA (678bp) protein (226aa)
Putative uncharacterized protein id=2492617 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_27
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26697..28298
DNA (1602bp) protein (534aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit id=3004441 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28756..29643)
DNA (888bp) protein (296aa)
Beta-lactamase domain protein id=2534208 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_29
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29693..30994
DNA (1302bp) protein (434aa)
integral membrane sensor signal transduction histidine kinase; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
Histidine kinase id=2534202 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_591_curated_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30998..31537)
DNA (540bp) protein (180aa)
SCP-like extracellular id=2534198 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying items 1-30 of 60 in total

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