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scnpilot_p_inoc_scaffold_2804_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2804_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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743..1945
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003625391
Alanine dehydrogenase {ECO:0000313|EMBL:AHF15275.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alanine dehydrogenase
scnpilot_p_inoc_scaffold_2804_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2083..2814)
DNA (732bp) protein (244aa)
methyltransferase small; K15460 tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
Methyltransferase small n=1 Tax=Niabella soli DSM 19437 RepID=H1NNJ0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17511.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_2804_curated_3
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2849..3547)
DNA (699bp) protein (233aa)
regulator n=1 Tax=Niabella aurantiaca RepID=UPI0003605FD0
Two-component response regulator {ECO:0000313|EMBL:EDM35474.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
response regulator receiver
scnpilot_p_inoc_scaffold_2804_curated_4
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3584..5092)
DNA (1509bp) protein (503aa)
Redoxin domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4L6_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:ETZ19117.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
redoxin
scnpilot_p_inoc_scaffold_2804_curated_5
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5094..6614)
DNA (1521bp) protein (507aa)
Putative sensor-like histidine kinase YehU n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NNR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEQ29200.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
histidine kinase internal subunit
scnpilot_p_inoc_scaffold_2804_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6745..7791)
DNA (1047bp) protein (349aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingoba
O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NP58_9SPHI
scnpilot_p_inoc_scaffold_2804_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7899..9152)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP57_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15099.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_p_inoc_scaffold_2804_curated_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9316..10899
DNA (1584bp) protein (528aa)
peptide chain release factor 3 n=1 Tax=Niabella aurantiaca RepID=UPI00037A8AAF
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peptide chain release factor 3 (bRF-3); K02837 peptide chain release factor 3
scnpilot_p_inoc_scaffold_2804_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10908..11363
DNA (456bp) protein (152aa)
GCN5-related N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB5_NIAKG
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEV99355.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 9 items

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