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scnpilot_p_inoc_scaffold_358_curated

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_358_curated_1
unknown

Not on your lists

1..147
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_curated_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(198..1544)
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB4_NIAKG
scnpilot_p_inoc_scaffold_358_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1604..2344
DNA (741bp) protein (247aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364DF57
hypothetical protein; K07081
scnpilot_p_inoc_scaffold_358_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2419..6840
DNA (4422bp) protein (1474aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB1_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEV99351.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_358_curated_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6904..8016
DNA (1113bp) protein (371aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBS8_9SPHI
scnpilot_p_inoc_scaffold_358_curated_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8013..8951
DNA (939bp) protein (313aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase n=1 Tax=Rudanella lutea RepID=UPI00035E544B
scnpilot_p_inoc_scaffold_358_curated_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9013..9960)
DNA (948bp) protein (316aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKS6_CHIPD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU62142.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_358_curated_8
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9957..11066)
DNA (1110bp) protein (370aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EAY29756.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EAY29756.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZI88_9BACT
scnpilot_p_inoc_scaffold_358_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11130..12281)
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKS8_CHIPD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU62144.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_358_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12282..13094)
DNA (813bp) protein (271aa)
Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPG6_CHIPD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACU60602.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_358_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13107..14111
DNA (1005bp) protein (335aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NLU0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17300.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase; K07011
scnpilot_p_inoc_scaffold_358_curated_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14142..15059)
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=C4EXN5_HAEIF
Putative glycosyltransferase {ECO:0000313|EMBL:GAO43713.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_p_inoc_scaffold_358_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15144..17627)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLT8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17302.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_358_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17718..18026
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378D97C
Uncharacterized protein {ECO:0000313|EMBL:AHF17303.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_358_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18001..18798
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLT6_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF14766.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K09125 hypothetical protein
scnpilot_p_inoc_scaffold_358_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18959..19423)
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY9_NIAKG
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW00588.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_358_curated_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19430..20368)
DNA (939bp) protein (313aa)
Mg2 transporter protein CorA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY8_NIAKG
Putative MIT family transporter {ECO:0000313|EMBL:GAO43672.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Mg2 transporter protein CorA family protein; K03284 magnesium transporter
scnpilot_p_inoc_scaffold_358_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20406..21191)
DNA (786bp) protein (262aa)
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7]
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Diaminopimelate epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY7_NIAKG
scnpilot_p_inoc_scaffold_358_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21303..22181)
DNA (879bp) protein (293aa)
purine or other phosphorylase family 1; K00757 uridine phosphorylase [EC:2.4.2.3]
Purine or other phosphorylase family 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPE8_9SPHI
Phosphorylase {ECO:0000313|EMBL:AHF15028.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_358_curated_20
unknown

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comp(22341..22862)
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_curated_21
unknown

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comp(23140..23271)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_curated_22
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23279..23974)
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF20126.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
scnpilot_p_inoc_scaffold_358_curated_23
unknown

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24082..24321
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_curated_24
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24544..25434
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363A85A
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ81328.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_358_curated_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25431..26438
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000376061F
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ACU64041.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_358_curated_26
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26576..27484
DNA (909bp) protein (303aa)
Chloride peroxidase {ECO:0000313|EMBL:ADZ81327.1}; EC=1.11.1.10 {ECO:0000313|EMBL:ADZ81327.1};; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Chloride peroxidase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4S8_SPHS2
chloride peroxidase
scnpilot_p_inoc_scaffold_358_curated_27
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28339..29001
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:ETN94337.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
scnpilot_p_inoc_scaffold_358_curated_28
unknown

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29008..29136
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_curated_29
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29157..29648
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8WA20_MARHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG97239.1}; TaxID=1163748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus ATCC 49840.;"
scnpilot_p_inoc_scaffold_358_curated_30
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(29903..30619)
DNA (717bp) protein (239aa)
hypothetical protein id=133596 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT43704.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
hypothetical protein
Displaying items 1-30 of 81 in total

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