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scnpilot_p_inoc_scaffold_55_curated

Search features with annotation key words

Displaying items 1-30 of 714 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_55_curated_1
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

212..2464
DNA (2253bp) protein (751aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11Z39_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG57327.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_p_inoc_scaffold_55_curated_2
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

2729..3166
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3ENI4_CHLPB
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACE05073.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
scnpilot_p_inoc_scaffold_55_curated_3
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3892..6273
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QIS8_9FLAO
Acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein {ECO:0000313|EMBL:AHM62865.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein
scnpilot_p_inoc_scaffold_55_curated_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6419..6856
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036B9573
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
scnpilot_p_inoc_scaffold_55_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6967..7494)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000379EE0A
Uncharacterized protein {ECO:0000313|EMBL:KIC93221.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_p_inoc_scaffold_55_curated_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7943..9670)
DNA (1728bp) protein (576aa)
Beta-lactamase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0J0_9FLAO
Beta-lactamase {ECO:0000313|EMBL:EFK33989.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
Beta-lactamase
scnpilot_p_inoc_scaffold_55_curated_7
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9977..11380
DNA (1404bp) protein (468aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I2K5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJF42962.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
putative protease with the C-terminal PDZ domain
scnpilot_p_inoc_scaffold_55_curated_8
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11479..12939
DNA (1461bp) protein (487aa)
Alkyl hydroperoxide reductase and/or thiol-speci fic antioxidant family (AhpC/TSA) protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KKZ0_9FLAO
Alkyl hydroperoxide reductase and/or thiol-speci fic antioxidant family (AhpC/TSA) protein {ECO:0000313|EMBL:CDF79562.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
thiol-disulfide isomerase-like thioredoxin
scnpilot_p_inoc_scaffold_55_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13023..15275)
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM56_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17281.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_55_curated_10
unknown

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comp(15313..16131)
DNA (819bp) protein (273aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_55_curated_11
unknown

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comp(16431..17711)
DNA (1281bp) protein (427aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_55_curated_12
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17735..19756)
DNA (2022bp) protein (674aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2F3_PEDHD
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_p_inoc_scaffold_55_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20017..21966
DNA (1950bp) protein (650aa)
ATP-binding region ATPase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX22_PEDHD
ATPase
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ACU04316.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_55_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21966..22580
DNA (615bp) protein (205aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NM69_9SPHI
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHF14730.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
response regulator receiver
scnpilot_p_inoc_scaffold_55_curated_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22660..23724
DNA (1065bp) protein (355aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYP6_DYAFD
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACT93401.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_55_curated_16
unknown

Not on your lists

23793..24416
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_55_curated_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24491..26320
DNA (1830bp) protein (610aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFG2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94365.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative signal transduction histidine kinase
scnpilot_p_inoc_scaffold_55_curated_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26317..27063
DNA (747bp) protein (249aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFG3_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO42356.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_55_curated_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27183..29510
DNA (2328bp) protein (776aa)
TonB-dependent receptor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y368_PEDHD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACU05293.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_55_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29592..30098)
DNA (507bp) protein (169aa)
CinA domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM0_NIAKG
CinA domain-containing protein
CinA domain protein {ECO:0000313|EMBL:AEV99459.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_55_curated_21
unknown

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comp(30146..30865)
DNA (720bp) protein (240aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_55_curated_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31153..31599
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D5530
DinB superfamily protein {ECO:0000313|EMBL:KIC95947.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_55_curated_23
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31814..32254)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RRN4_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16690.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_55_curated_24
Prevotella intermedia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32353..33327)
DNA (975bp) protein (325aa)
Redoxin n=1 Tax=Prevotella intermedia (strain 17) RepID=I1YW50_PREI7
redoxin
Thioredoxin {ECO:0000313|EMBL:KJJ87615.1}; TaxID=1347790 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella intermedia ZT.;"
scnpilot_p_inoc_scaffold_55_curated_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33388..34869)
DNA (1482bp) protein (494aa)
amino acid permease n=1 Tax=Rudanella lutea RepID=UPI00037B01A5
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
Amino acid permease-associated region {ECO:0000313|EMBL:ADB41142.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_55_curated_26
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34878..35432)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R8J8_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31380.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_p_inoc_scaffold_55_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35485..36423)
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ketopantoate reductase ApbA/PanE domain-containing protein; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
Ketopantoate reductase ApbA/PanE domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1F5_DYAFD
scnpilot_p_inoc_scaffold_55_curated_28
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36485..37963
DNA (1479bp) protein (493aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8R3_SPHS2
GntR family transcriptional regulator
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADZ81105.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_55_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38051..38602)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00035F3C07
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94117.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_55_curated_30
unknown

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comp(38638..39069)
DNA (432bp) protein (144aa)

This feature has no annotations

Displaying items 1-30 of 714 in total

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