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scnpilot_p_inoc_scaffold_218_curated

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_218_curated_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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471..1829
DNA (1359bp) protein (453aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22]
Cystathionine beta-synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN4_NIAKG
Cystathionine beta-synthase {ECO:0000313|EMBL:KIC89308.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_p_inoc_scaffold_218_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2519..3313
DNA (795bp) protein (265aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN5_NIAKG
Iron ABC transporter {ECO:0000313|EMBL:KIC93252.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_218_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3462..4559
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00783.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_218_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4810..5880
DNA (1071bp) protein (357aa)
fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AEW00785.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AEW00785.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Fructose-bisphosphate aldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN8_NIAKG
scnpilot_p_inoc_scaffold_218_curated_5
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

6074..7147
DNA (1074bp) protein (358aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:KER10764.1}; EC=4.1.2.13 {ECO:0000313|EMBL:KER10764.1};; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIS8_RHOMR
scnpilot_p_inoc_scaffold_218_curated_6
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

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comp(7571..8098)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=1968813 bin=GWD2_Clostridiales_32_19 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
hypothetical protein
Tax=GWD2_Clostridiales_32_19_curated
scnpilot_p_inoc_scaffold_218_curated_7
unknown

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comp(8215..8859)
DNA (645bp) protein (215aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_8
unknown

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comp(9412..9789)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_9
unknown

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comp(10225..10623)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10642..11163)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCT1_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY50670.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_218_curated_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11187..12383)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NMC9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAO44801.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_p_inoc_scaffold_218_curated_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12640..13275
DNA (636bp) protein (212aa)
Putative membrane protein n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3K7E3_PSEPF
Membrane protein {ECO:0000313|EMBL:KIF63044.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
scnpilot_p_inoc_scaffold_218_curated_13
unknown

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comp(13281..13703)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14142..15029
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTC0_HALH1
hypothetical protein; K08994 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEE51177.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_218_curated_15
unknown

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15078..15635
DNA (558bp) protein (186aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_16
unknown

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15614..15958
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16887..19295
DNA (2409bp) protein (803aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQA9_9SPHI
Peptidase S9 {ECO:0000313|EMBL:AHF15881.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
scnpilot_p_inoc_scaffold_218_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19351..21282
DNA (1932bp) protein (644aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Niabella soli DSM 19437 RepID=H1NNN5_9SPHI
Redoxin {ECO:0000313|EMBL:AHF15233.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
scnpilot_p_inoc_scaffold_218_curated_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21475..22389
DNA (915bp) protein (305aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI0003724CA1
scnpilot_p_inoc_scaffold_218_curated_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22510..22947
DNA (438bp) protein (146aa)
SsrA-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMU0_9SPHI
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SsrA-binding protein; K03664 SsrA-binding protein
scnpilot_p_inoc_scaffold_218_curated_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22993..23916
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE77_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93907.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_218_curated_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24029..25474
DNA (1446bp) protein (482aa)
Redoxin domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QH77_SPILD
redoxin
Redoxin domain protein {ECO:0000313|EMBL:ADB36843.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_218_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25524..28046)
DNA (2523bp) protein (841aa)
DNA topoisomerase; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Niabella soli DSM 19437 RepID=H1NMU1_9SPHI
DNA topoisomerase IV subunit A {ECO:0000313|EMBL:AHF14431.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_218_curated_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28092..28943)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMU3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14429.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_218_curated_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28985..30892)
DNA (1908bp) protein (636aa)
DNA topoisomerase type IIA subunit B domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNA8_9SPHI
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:AHF15322.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_218_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31096..32562
DNA (1467bp) protein (489aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE72_NIAKG
ABC transporter; K05776 molybdate transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:AEV97263.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_218_curated_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32492..34783)
DNA (2292bp) protein (764aa)
Glucosylglycerol-phosphate synthase n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DPW9_9GAMM
Glucosylglycerol-phosphate synthase {ECO:0000313|EMBL:KIC90917.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glucosylglycerol-phosphate synthase
scnpilot_p_inoc_scaffold_218_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35271..36929)
DNA (1659bp) protein (553aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBF3_NIAKG
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEW03453.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_218_curated_29
unknown

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comp(36958..37818)
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_218_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37963..38655
DNA (693bp) protein (231aa)
PhoB family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI0003644C34
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW03452.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 115 in total

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