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scnpilot_p_inoc_scaffold_263_curated

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_263_curated_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

218..691
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLA5_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08607.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_263_curated_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

811..1116
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBM4_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KHJ37755.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_263_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1374..1877
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YED4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27168.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_263_curated_4
unknown

Not on your lists

comp(1968..3539)
DNA (1572bp) protein (524aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

4199..4858
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_263_curated_6
unknown

Not on your lists

5134..5718
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_7
unknown

Not on your lists

5945..6193
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_8
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6286..6873
DNA (588bp) protein (196aa)
Macro domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EV00_9ACTO
Appr-1-p processing protein {ECO:0000313|EMBL:KFF09291.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
appr-1-p processing domain protein
scnpilot_p_inoc_scaffold_263_curated_9
unknown

Not on your lists

6860..6955
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6988..7722)
DNA (735bp) protein (245aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT73_CHIPD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU60863.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_263_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7719..8780)
DNA (1062bp) protein (354aa)
Signal transduction histidine kinase, LytS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT72_CHIPD
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACU60862.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_263_curated_12
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8777..10513)
DNA (1737bp) protein (579aa)
Peptidase S41 n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UIB6_9FLAO
peptidase S41
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
scnpilot_p_inoc_scaffold_263_curated_13
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10837..12597
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DHT3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFF00015.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_263_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12965..14005
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02894.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_263_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14016..14549
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02895.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_263_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14634..15104
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBE8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03448.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_263_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15207..15710)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLX7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17284.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_263_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15808..19803)
DNA (3996bp) protein (1332aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLX6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17285.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
histidine kinase
scnpilot_p_inoc_scaffold_263_curated_19
unknown

Not on your lists

comp(20067..20360)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_20
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20762..22495)
DNA (1734bp) protein (578aa)
Metallo-dependent hydrolase with a NTF2_like superfamily domain n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IUP1_PSYTT
metallo-dependent hydrolase with a NTF2_like superfamily domain
Metallo-dependent hydrolase with a NTF2_like superfamily domain {ECO:0000313|EMBL:AFU69190.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
scnpilot_p_inoc_scaffold_263_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22833..23672)
DNA (840bp) protein (280aa)
Peptidase M56 BlaR1 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VX85_DYAFD
Peptidase M56 BlaR1 {ECO:0000313|EMBL:ACT91558.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
peptidase M56 BlaR1
scnpilot_p_inoc_scaffold_263_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23847..25415)
DNA (1569bp) protein (523aa)
Peptidase M56 BlaR1 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VX85_DYAFD
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:ACT91558.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_263_curated_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25428..25835)
DNA (408bp) protein (136aa)
transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B646BC
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ACU60233.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_263_curated_24
unknown

Not on your lists

comp(25988..26101)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_25
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26208..28778
DNA (2571bp) protein (857aa)
N-acetyl-beta-hexosaminidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM38_SOLCM
N-acetyl-beta-hexosaminidase
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:AFD08960.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_263_curated_26
unknown

Not on your lists

29264..29602
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_263_curated_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29751..30845
DNA (1095bp) protein (365aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NMY4_9SPHI
Secretion protein HylD {ECO:0000313|EMBL:AHF15421.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
scnpilot_p_inoc_scaffold_263_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30902..34051
DNA (3150bp) protein (1050aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Niabella soli DSM 19437 RepID=H1NMY3_9SPHI
Multidrug transporter AcrB {ECO:0000313|EMBL:AHF15422.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_p_inoc_scaffold_263_curated_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34056..35507
DNA (1452bp) protein (484aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Niabella soli DSM 19437 RepID=H1NMY2_9SPHI
RND transporter {ECO:0000313|EMBL:AHF15423.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_p_inoc_scaffold_263_curated_30
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35585..37105)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036858B8
Glycosyltransferase, GTnc family {ECO:0000313|EMBL:KGL61730.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
Displaying items 1-30 of 107 in total

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