ggKbase home page

scnpilot_p_inoc_scaffold_90_curated_8

Organism: scnpilot_dereplicated_Sphingobacteriales_3

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(5883..6236)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FD59_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 116.0
  • Bit_score: 212
  • Evalue 3.30e-52
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 116.0
  • Bit_score: 212
  • Evalue 1.00e-52
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABQ06859.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 116.0
  • Bit_score: 212
  • Evalue 4.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 354
ATGTATGAAAGAAAAACAAAGCCCAATCTAAACTGCGGACTGGATCTCATTGGTGAAGTCTTATACGGTAAATGGAAAATCCGCTTGTTGTGGTTTATTAATGAAGGGTATAAGCGTCCAAGCGAATTACAGCGAAAAATTCCCGACGCTTCAAGGCGTGTACTGAATATGCAATTAAAAGAACTGGAAGAACACGAATTGATTTCGAAAACTATATATCCCGTTGTTCCTCCAAAAGTAGAATACAACCTTACAGAATTTGGGAAAAGCCTGATTCCGGTTATTGCAGCATTAGGAAAATGGGGCGATGAAAATGAAGGGCGATTGAGAAAAATACTTTTAAAAGAAGAATAA
PROTEIN sequence
Length: 118
MYERKTKPNLNCGLDLIGEVLYGKWKIRLLWFINEGYKRPSELQRKIPDASRRVLNMQLKELEEHELISKTIYPVVPPKVEYNLTEFGKSLIPVIAALGKWGDENEGRLRKILLKEE*