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scnpilot_p_inoc_scaffold_90_curated

Search features with annotation key words

Displaying items 1-30 of 388 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_90_curated_1
unknown

Not on your lists

3..98
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_90_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


327..578
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT0_NIAKG
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_90_curated_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

770..1948
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366F2EF
Uncharacterized protein {ECO:0000313|EMBL:KIC93869.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_90_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1996..2757
DNA (762bp) protein (254aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Triosephosphate isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS8_NIAKG
scnpilot_p_inoc_scaffold_90_curated_5
unknown

Not on your lists

2806..3174
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_90_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3176..4303)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98520.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_90_curated_7
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4436..5830
DNA (1395bp) protein (465aa)
Polysaccharide biosynthesis protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XCZ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KFF05225.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
PTS system polysaccharide transporter
scnpilot_p_inoc_scaffold_90_curated_8
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5883..6236)
DNA (354bp) protein (118aa)
Transcriptional regulator, HxlR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FD59_FLAJ1
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABQ06859.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_90_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6273..7154
DNA (882bp) protein (294aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1A4_PALPW
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADQ78498.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_90_curated_10
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7236..7553
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W886_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFE97932.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_90_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7783..8787
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IU57_THEET
Uncharacterized protein {ECO:0000313|EMBL:KIC91803.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_p_inoc_scaffold_90_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8788..9705)
DNA (918bp) protein (306aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL5_9SPHI
Sugar phosphate isomerase {ECO:0000313|EMBL:AHF14801.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase domain-containing protein
scnpilot_p_inoc_scaffold_90_curated_13
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9750..10316)
DNA (567bp) protein (189aa)
twin-arginine translocation pathway signal protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4A752
Contig73, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76124.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
twin-arginine translocation pathway signal
scnpilot_p_inoc_scaffold_90_curated_14
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10360..12078)
DNA (1719bp) protein (573aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNS6_NIAKG
Contig73, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76133.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
glucose-methanol-choline oxidoreductase
scnpilot_p_inoc_scaffold_90_curated_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12084..13769)
DNA (1686bp) protein (562aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8A5_SPHS2
GMC family oxidoreductase {ECO:0000313|EMBL:AKD02079.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
glucose-methanol-choline oxidoreductase
scnpilot_p_inoc_scaffold_90_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13831..14727)
DNA (897bp) protein (299aa)
xylose isomerase; K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL6_9SPHI
Hydroxypyruvate isomerase {ECO:0000313|EMBL:AHF14800.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_90_curated_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14780..16003)
DNA (1224bp) protein (408aa)
Nucleoside H+ symporter n=1 Tax=uncultured organism RepID=T1W843_9ZZZZ
Major facilitator transporter {ECO:0000313|EMBL:ETZ24219.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
nucleoside:proton symporter
scnpilot_p_inoc_scaffold_90_curated_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16035..17327)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB98_NIAKG
Signal peptide protein {ECO:0000313|EMBL:KIC92973.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_90_curated_19
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17440..18609
DNA (1170bp) protein (390aa)
Putative oxidoreductase ydgJ n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N578_9BACT
Oxidoreductase {ECO:0000313|EMBL:AKD02076.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_90_curated_20
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18773..19828
DNA (1056bp) protein (352aa)
AP endonuclease n=1 Tax=Pedobacter agri RepID=UPI00029A7BFE
AP endonuclease {ECO:0000313|EMBL:KIA92931.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
AP endonuclease 2 domain protein
scnpilot_p_inoc_scaffold_90_curated_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19871..20266
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000360A6DE
Cytochrome C {ECO:0000313|EMBL:AHF14797.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cytochrome c551/c552
scnpilot_p_inoc_scaffold_90_curated_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20276..21049
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z3X3_FLABF
Uncharacterized protein {ECO:0000313|EMBL:GAO44223.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_p_inoc_scaffold_90_curated_23
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21237..21656
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL84488.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
putative integral membrane protein id=5045771 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
scnpilot_p_inoc_scaffold_90_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22083..23576)
DNA (1494bp) protein (498aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyruvate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD6_NIAKG
scnpilot_p_inoc_scaffold_90_curated_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23609..24592)
DNA (984bp) protein (328aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339, ECO:0000256|SAAS:SAAS00197180};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD7_NIAKG
scnpilot_p_inoc_scaffold_90_curated_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24986..27334
DNA (2349bp) protein (783aa)
prolyl oligopeptidase; K01322 prolyl oligopeptidase [EC:3.4.21.26]
Prolyl oligopeptidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPN4_9SPHI
Prolyl endopeptidase {ECO:0000313|EMBL:AHF14962.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_90_curated_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27397..28278
DNA (882bp) protein (294aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV5_9SPHI
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AHF14909.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_90_curated_28
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28287..28886)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C1FCD
Uncharacterized protein {ECO:0000313|EMBL:KGE89837.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein; K09164 hypothetical protein
scnpilot_p_inoc_scaffold_90_curated_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29101..29991)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD9_NIAKG
Amidinotransferase {ECO:0000313|EMBL:KIC93345.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_90_curated_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30037..31485)
DNA (1449bp) protein (483aa)
arginine deiminase; K01478 arginine deiminase [EC:3.5.3.6]
Arginine deiminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE0_NIAKG
Amidinotransferase {ECO:0000313|EMBL:KIC93346.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Displaying items 1-30 of 388 in total

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