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scnpilot_p_inoc_scaffold_1560_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1560_curated_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..272)
DNA (270bp) protein (90aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBE0_9SPHN
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:GAD50786.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
flhA1; flagellar biosynthesis pathway protein FlhA; K02400 flagellar biosynthesis protein FlhA
scnpilot_p_inoc_scaffold_1560_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(265..1353)
DNA (1089bp) protein (363aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ43_9SPHN
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:GAD50787.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
flhB; Flagellar biosynthetic protein flhB
scnpilot_p_inoc_scaffold_1560_curated_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1356..2123)
DNA (768bp) protein (256aa)
Flagellar biosynthetic protein FliR n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7R5_9SPHN
Flagellar biosynthetic protein FliR {ECO:0000313|EMBL:GAD50788.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
putative flagellar biosynthetic protein fliR
scnpilot_p_inoc_scaffold_1560_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2132..2401)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZH2_9SPHN
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:GAD50789.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
fliQ; flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
scnpilot_p_inoc_scaffold_1560_curated_5
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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2619..4220
DNA (1602bp) protein (534aa)
Putative dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR63_9SPHN
putative dioxygenase; K11159 carotenoid cleavage dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
scnpilot_p_inoc_scaffold_1560_curated_6
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4232..6331
DNA (2100bp) protein (700aa)
quinohemoprotein alcohol dehydrogenase; K00114 alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0INM9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB30450.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
scnpilot_p_inoc_scaffold_1560_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6348..6956
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43824.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1560_curated_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7110..8033)
DNA (924bp) protein (308aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS51_9SPHN
putative hydrolase; K07046
Putative hydrolase {ECO:0000313|EMBL:BAK66211.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1560_curated_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8193..10709)
DNA (2517bp) protein (839aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS41_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66201.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1560_curated_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11129..12109)
DNA (981bp) protein (327aa)
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS39_9SPHN
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAK66199.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1560_curated_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12318..14576
DNA (2259bp) protein (753aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQL3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65885.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1560_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14697..15971)
DNA (1275bp) protein (425aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQL4_9SPHN
Putative niacin/nicotinamide transporter NaiP {ECO:0000313|EMBL:AKH42132.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_1560_curated_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16242..17024
DNA (783bp) protein (261aa)
SDR-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS46_9SPHN
SDR-family protein
SDR-family protein {ECO:0000313|EMBL:BAK66206.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1560_curated_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17109..18263
DNA (1155bp) protein (385aa)
Alcohol dehydrogenase 2 {ECO:0000313|EMBL:AKH42131.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AKH42131.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Iron-containing alcohol dehydrogenase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIN4_BRESC
iron-containing alcohol dehydrogenase
scnpilot_p_inoc_scaffold_1560_curated_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18278..18733
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP34_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65673.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1560_curated_16
unknown

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18747..18875
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 16 items

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