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scnpilot_p_inoc_scaffold_761_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_761_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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474..1325
DNA (852bp) protein (284aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:AKH42587.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AKH42587.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G760_NOVAD
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_761_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1372..2490
DNA (1119bp) protein (373aa)
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:AKH42588.1}; EC=1.1.1.90 {ECO:0000313|EMBL:AKH42588.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aryl-alcohol dehydrogenase (EC:1.1.1.90); K00055 aryl-alcohol dehydrogenase [EC:1.1.1.90]
Aryl-alcohol dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II51_9SPHN
scnpilot_p_inoc_scaffold_761_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2600..3601
DNA (1002bp) protein (334aa)
Sorbitol dehydrogenase {ECO:0000313|EMBL:AKH42589.1}; EC=1.1.1.14 {ECO:0000313|EMBL:AKH42589.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
GroES-related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G759_NOVAD
molecular chaperone GroES
scnpilot_p_inoc_scaffold_761_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3649..6114)
DNA (2466bp) protein (822aa)
Peptidase S8 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB25_9SPHN
Peptidase S8 family protein {ECO:0000313|EMBL:GAD50651.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
subtilase
scnpilot_p_inoc_scaffold_761_curated_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6370..7209
DNA (840bp) protein (280aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=DAPD_NOVAD rbh
scnpilot_p_inoc_scaffold_761_curated_6
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7315..7482
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2G327_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL24020.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7493..7675
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJQ2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH04562.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7712..8149
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI0003720724
Ion channel {ECO:0000313|EMBL:AKH44074.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ion transport 2 domain-containing protein
scnpilot_p_inoc_scaffold_761_curated_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8158..9426)
DNA (1269bp) protein (423aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Putative dipeptidase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPQ0_9SPHN
Membrane dipeptidase (Peptidase family M19) {ECO:0000313|EMBL:AKH44070.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_761_curated_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9530..9967
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E9M1_9SPHN
hypothetical protein; K09705 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ62038.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_p_inoc_scaffold_761_curated_11
unknown

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comp(10863..10973)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_761_curated_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11153..12418)
DNA (1266bp) protein (422aa)
Gallate dioxygenase n=2 Tax=Sphingomonadaceae RepID=G2IKE5_9SPHN
desB; gallate dioxygenase
Gallate dioxygenase {ECO:0000313|EMBL:BAD80871.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
scnpilot_p_inoc_scaffold_761_curated_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12685..13947)
DNA (1263bp) protein (421aa)
Gallate dioxygenase {ECO:0000313|EMBL:AKH44064.1}; EC=1.13.11.57 {ECO:0000313|EMBL:AKH44064.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Gallate dioxygenase n=2 Tax=Sphingomonadaceae RepID=G2IKE5_9SPHN
desB; gallate dioxygenase
scnpilot_p_inoc_scaffold_761_curated_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14093..14674)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB20_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50646.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein; K06910
scnpilot_p_inoc_scaffold_761_curated_15
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14829..15203
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P3U9_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:KGB53799.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15208..15996)
DNA (789bp) protein (263aa)
Extradiol dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKE9_9SPHN
LigB family dioxygenase {ECO:0000313|EMBL:AKH44059.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
extradiol dioxygenase
scnpilot_p_inoc_scaffold_761_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16154..16462
DNA (309bp) protein (103aa)
PhnA protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
PhnA protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7A3_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH44053.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_761_curated_18
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16472..16906)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDH0_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_761_curated_19
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16944..17093)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AQ51_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL35019.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
scnpilot_p_inoc_scaffold_761_curated_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17109..17684)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP14_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50640.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_21
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17909..19063
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003760CEE
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:AJA10693.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
filamentation induced by cAMP protein fic
scnpilot_p_inoc_scaffold_761_curated_22
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..19538)
DNA (372bp) protein (124aa)
DNA topoisomerase IV subunit B n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCB0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO91410.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
scnpilot_p_inoc_scaffold_761_curated_23
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19657..21189)
DNA (1533bp) protein (511aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKF0_9SPHN
Scaffold4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32876.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_24
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21389..22981)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ITL9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP82123.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_25
unknown

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comp(23018..23935)
DNA (918bp) protein (306aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_761_curated_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24035..24238)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7886D
Uncharacterized protein {ECO:0000313|EMBL:GAO53783.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24231..26090)
DNA (1860bp) protein (620aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Phosphomethylpyrimidine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YAZ9_9SPHN
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
scnpilot_p_inoc_scaffold_761_curated_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26380..26763
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SF27_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AKH44048.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_761_curated_29
unknown

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comp(27062..27457)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_761_curated_30
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27593..27994)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNZ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50620.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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