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scnpilot_p_inoc_scaffold_2526_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2526_curated_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..632
DNA (630bp) protein (210aa)
hypothetical protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Fmu (Sun) n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGX3_9SPHN
Fmu (Sun) {ECO:0000313|EMBL:CCA93817.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_2526_curated_2
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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728..1255
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9Y2_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:KEO87363.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2526_curated_3
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1362..1847)
DNA (486bp) protein (162aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
putative (di)nucleoside polyphosphate hydrolase (EC:3.6.1.-); K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J0K5_9SPHN
scnpilot_p_inoc_scaffold_2526_curated_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1844..2794)
DNA (951bp) protein (317aa)
Lipolytic enzyme n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7H7_NOVAD
Esterase/lipase {ECO:0000313|EMBL:GAO55671.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
lipolytic protein
scnpilot_p_inoc_scaffold_2526_curated_5
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2987..4945
DNA (1959bp) protein (653aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-oxoglutarate oxidoreductase subunit KorA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4L3_9SPHN
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:KHK91904.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
scnpilot_p_inoc_scaffold_2526_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4942..5976
DNA (1035bp) protein (345aa)
2-oxoglutarate oxidoreductase subunit KorB {ECO:0000313|EMBL:AKH41347.1}; EC=1.2.-.- {ECO:0000313|EMBL:AKH41347.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3); K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P801_9SPHN
scnpilot_p_inoc_scaffold_2526_curated_7
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5995..6696)
DNA (702bp) protein (234aa)
UPI0003D69973 related cluster n=1 Tax=unknown RepID=UPI0003D69973
Phosphoesterase {ECO:0000313|EMBL:ETI65289.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
phosphoesterase PA-phosphatase related
scnpilot_p_inoc_scaffold_2526_curated_8
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7106..8101
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBQ4_9SPHN
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_2526_curated_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8106..9521
DNA (1416bp) protein (472aa)
phr; deoxyribodipyrimidine photo-lyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0003114AEB
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_2526_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9610..10830
DNA (1221bp) protein (407aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AKH41350.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AKH41350.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIR4_9SPHN
scnpilot_p_inoc_scaffold_2526_curated_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10858..11586)
DNA (729bp) protein (243aa)
SDR-family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4L0_9SPHN
SDR-family protein {ECO:0000313|EMBL:GAD48016.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_2526_curated_12
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11586..12401)
DNA (816bp) protein (272aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Eryt
Amidophosphoribosyltransferase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9Z6_ERYLH
Displaying 12 items

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