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scnpilot_p_inoc_scaffold_4770_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4770_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..214)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2Y0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43495.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4770_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(386..844)
DNA (459bp) protein (153aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL68_9SPHN
RNA polymerase-binding transcription factor DksA {ECO:0000313|EMBL:AKH43494.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein
scnpilot_p_inoc_scaffold_4770_curated_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1176..1514
DNA (339bp) protein (113aa)
Sel1 repeat-containing protein n=2 Tax=Novosphingobium RepID=F6IJK5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54963.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Sel1 repeat-containing protein; K07126
scnpilot_p_inoc_scaffold_4770_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1548..2687)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3N5_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH43492.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09919 hypothetical protein
scnpilot_p_inoc_scaffold_4770_curated_5
unknown

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2841..3443
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_4770_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3530..4294)
DNA (765bp) protein (255aa)
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUQ6_9SPHN
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:GAD49114.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
glycerophosphoryl diester phosphodiesterase
scnpilot_p_inoc_scaffold_4770_curated_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4291..4749)
DNA (459bp) protein (153aa)
Endoribonuclease L-PSP n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3N3_NOVAD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABD27540.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_4770_curated_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4765..5391)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0C2E
Uncharacterized protein {ECO:0000313|EMBL:GAO54959.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4770_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5388..5675)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E70B
Uncharacterized protein {ECO:0000313|EMBL:GAD49111.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4770_curated_10
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5736..6098
DNA (363bp) protein (121aa)
Chemotaxis protein CheY n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSP1_9SPHN
Chemotaxis protein CheY {ECO:0000313|EMBL:EQB19341.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
two-component system PleD family response regulator DivK; K11443 two-component system, cell cycle response regulator DivK
scnpilot_p_inoc_scaffold_4770_curated_11
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6108..6905)
DNA (798bp) protein (266aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037AA42A
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_4770_curated_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6973..7842
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DCFC48
L-carnitine dehydratase/bile acid-inducible protein F
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying 12 items

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