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scnpilot_p_inoc_scaffold_680_curated

Search features with annotation key words

Displaying items 31-43 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_680_curated_31
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(39043..39933)
DNA (891bp) protein (297aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV7_9SPHN
putative oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_680_curated_32
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39971..40864)
DNA (894bp) protein (298aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL00_9SPHN
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_680_curated_33
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41001..41819
DNA (819bp) protein (273aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Pseudomonas putida (strain KT2440) RepID=Q88LI1_PSEPK
short chain dehydrogenase/reductase oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_680_curated_34
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41939..43150
DNA (1212bp) protein (404aa)
MFS transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6AE66
putative major facilitator superfamily transporter
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_680_curated_35
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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43243..44031
DNA (789bp) protein (263aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E52AC6
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EEB80263.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
scnpilot_p_inoc_scaffold_680_curated_36
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(44039..44566)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKS2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67474.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_680_curated_37
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44681..46270
DNA (1590bp) protein (530aa)
Oxygen-dependent choline dehydrogenase {ECO:0000313|EMBL:AKH41500.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AKH41500.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036FE76C
choline dehydrogenase
scnpilot_p_inoc_scaffold_680_curated_38
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(46258..47571)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F55D1
Uncharacterized protein {ECO:0000313|EMBL:ESQ89224.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
major facilitator transporter
scnpilot_p_inoc_scaffold_680_curated_39
unknown

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47787..48308
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_680_curated_40
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48426..49658)
DNA (1233bp) protein (411aa)
ATP-dependent RNA helicase DeaD {ECO:0000313|EMBL:AKH42641.1}; EC=3.6.4.13 {ECO:0000313|EMBL:AKH42641.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
DEAD/DEAH box helicase-like protein; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Putative helicase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5X2_9SPHN
scnpilot_p_inoc_scaffold_680_curated_41
Caenorhabditis briggsae, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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50776..52101
DNA (1326bp) protein (442aa)
Protein CBG27112 n=1 Tax=Caenorhabditis briggsae RepID=B6IHI7_CAEBR
Protein CBG27112 {ECO:0000313|EMBL:CAR99367.1}; TaxID=6238 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis briggsae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_680_curated_42
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52260..53303
DNA (1044bp) protein (348aa)
Rod shape-determining protein MreB and related proteins n=2 Tax=Novosphingobium PF5_9SPHN">RepID=F6IPF5_9SPHN
Rod shape-determining protein MreB {ECO:0000313|EMBL:KHK91325.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
rod shape-determining protein MreB and-like proteins; K03569 rod shape-determining protein MreB and related proteins
scnpilot_p_inoc_scaffold_680_curated_43
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53696..56323
DNA (2628bp) protein (876aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A8L4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD51103.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
Displaying items 31-43 of 43 in total

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