ggKbase home page

scnpilot_p_inoc_scaffold_562_curated

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_562_curated_31
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39045..40241
DNA (1197bp) protein (399aa)
UPI0003D04624 related cluster n=1 Tax=unknown RepID=UPI0003D04624
Uncharacterized protein {ECO:0000313|EMBL:ESZ26609.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
hypothetical protein
scnpilot_p_inoc_scaffold_562_curated_32
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40680..41861
DNA (1182bp) protein (394aa)
Chromate ion transporter (CHR) family chromate transporter n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNZ7_SPHYA
Chromate transporter {ECO:0000313|EMBL:KGB55620.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
chromate resistance protein
scnpilot_p_inoc_scaffold_562_curated_33
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42170..42802
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISR0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66420.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_562_curated_34
unknown

Not on your lists

comp(43053..43865)
DNA (813bp) protein (271aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_562_curated_35
unknown

Not on your lists

comp(44499..45632)
DNA (1134bp) protein (378aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_562_curated_36
unknown

Not on your lists

comp(45846..46025)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_562_curated_37
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46267..46914
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:KHS45845.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
scnpilot_p_inoc_scaffold_562_curated_38
unknown

Not on your lists

comp(47434..48174)
DNA (741bp) protein (247aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_562_curated_39
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48433..48690)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9STT4_9SYNE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KCZ97771.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
scnpilot_p_inoc_scaffold_562_curated_40
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48935..49600)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO55221.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
scnpilot_p_inoc_scaffold_562_curated_41
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49867..51051)
DNA (1185bp) protein (395aa)
integrase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA22E
Integrase {ECO:0000313|EMBL:GAO55220.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
integrase family protein
scnpilot_p_inoc_scaffold_562_curated_42
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51585..52406
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000305B6AC
Uncharacterized protein {ECO:0000313|EMBL:EZP79718.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_562_curated_43
unknown

Not on your lists

comp(52436..52681)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_562_curated_44
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52801..53976
DNA (1176bp) protein (392aa)
Aspartate aminotransferase {ECO:0000313|EMBL:AKH43964.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AKH43964.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aromatic-amino-acid transaminase (EC:2.6.1.57); K00832 aromatic-amino-acid transaminase [EC:2.6.1.57]
Aromatic-amino-acid transaminase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WKV5_9SPHN
scnpilot_p_inoc_scaffold_562_curated_45
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54096..54713)
DNA (618bp) protein (206aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase subunit alpha n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L8X3_9SPHN
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KHK93161.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
scnpilot_p_inoc_scaffold_562_curated_46
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54728..55705)
DNA (978bp) protein (326aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUK3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55051.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
scnpilot_p_inoc_scaffold_562_curated_47
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55709..56272)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKH5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43969.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_562_curated_48
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56275..57015)
DNA (741bp) protein (247aa)
Putative metal-dependent hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y784_9SPHN
Putative metal-dependent hydrolase {ECO:0000313|EMBL:GAD49061.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein; K07043
scnpilot_p_inoc_scaffold_562_curated_49
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56994..57479)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000319EE4E
hypothetical protein; K09160 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC62125.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
scnpilot_p_inoc_scaffold_562_curated_50
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57486..58112)
DNA (627bp) protein (209aa)
Copper chaperone SCO1/SenC family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2T1_9SPHN
SCO1/SenC {ECO:0000313|EMBL:AKH43972.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
electron transport protein; K07152
scnpilot_p_inoc_scaffold_562_curated_51
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58195..58815
DNA (621bp) protein (207aa)
Ankyrin n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4D5_NOVAD
Ankyrin repeats (3 copies) {ECO:0000313|EMBL:AKH43973.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ankyrin
scnpilot_p_inoc_scaffold_562_curated_52
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58799..59470
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEP8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43974.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_562_curated_53
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59676..59930
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL24_9SPHN
Iron transporter {ECO:0000313|EMBL:KHK93154.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein; K04758 ferrous iron transport protein A
scnpilot_p_inoc_scaffold_562_curated_54
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59927..61780
DNA (1854bp) protein (618aa)
Ferrous iron transport protein B n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL32_9SPHN
Ferrous iron transport protein B {ECO:0000313|EMBL:AKH43976.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ferrous iron transport protein B; K04759 ferrous iron transport protein B
scnpilot_p_inoc_scaffold_562_curated_55
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61901..62278
DNA (378bp) protein (126aa)
Single-stranded DNA-binding protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEM6_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
Displaying items 31-55 of 55 in total

View Taxonomy