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scnpilot_p_inoc_scaffold_1219_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1219_curated_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..113)
DNA (111bp) protein (37aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
Imidazoleglycerol-phosphate dehydratase {ECO:0000255|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000255|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000255|HAMAP-Rule:MF_00076};; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00030702A8
scnpilot_p_inoc_scaffold_1219_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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209..709
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZ33_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50654.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein; K09985 hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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768..1157
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9M4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS48210.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1202..1843
DNA (642bp) protein (214aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L3L0_9SPHN
scnpilot_p_inoc_scaffold_1219_curated_5
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2278..2928)
DNA (651bp) protein (217aa)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6165F
Membrane protein {ECO:0000313|EMBL:KHL25018.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein; K09125 hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3071..4384
DNA (1314bp) protein (438aa)
Nucleoside permease n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7L2_ERYLH
Nucleoside permease NupX {ECO:0000313|EMBL:AKH41816.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
nucleoside permease; K03317 concentrative nucleoside transporter, CNT family
scnpilot_p_inoc_scaffold_1219_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4396..5325
DNA (930bp) protein (310aa)
2-oxoglutarate-dependent ethylene/succinate-forming enzyme {ECO:0000313|EMBL:AKH41815.1}; EC=1.13.12.19 {ECO:0000313|EMBL:AKH41815.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Oxidoreductase iron/ascorbate family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCU8_9SPHN
oxidoreductase iron/ascorbate family protein; K06892
scnpilot_p_inoc_scaffold_1219_curated_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5598..9044
DNA (3447bp) protein (1149aa)
Oar-like outer membrane protein, OmpA family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7L4_ERYLH
Oar-like outer membrane protein, OmpA family protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_1219_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9210..10028
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNY7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50610.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
UspA domain-containing protein
scnpilot_p_inoc_scaffold_1219_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10196..12145
DNA (1950bp) protein (650aa)
Quinate/shikimate dehydrogenase (Quinone) {ECO:0000313|EMBL:AKH42191.1}; EC=1.1.5.8 {ECO:0000313|EMBL:AKH42191.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
quinoprotein glucose dehydrogenase; K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2]
Quinoprotein glucose dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL53_9SPHN
scnpilot_p_inoc_scaffold_1219_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12181..13191
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL52_9SPHN
Glyoxalase-like domain protein {ECO:0000313|EMBL:AKH42192.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13298..13666)
DNA (369bp) protein (123aa)
Cytochrome c552 n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T0C0_9RHOB
Cytochrome c6 {ECO:0000313|EMBL:AKH42193.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
cytochrome c
scnpilot_p_inoc_scaffold_1219_curated_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13893..14387
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W720_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AKH42194.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1219_curated_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14394..15086
DNA (693bp) protein (231aa)
HupE/UreJ protein n=1 Tax=uncultured organism RepID=T1W7Q1_9ZZZZ
HupE / UreJ protein {ECO:0000313|EMBL:AKH42195.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_15

Not on your lists

15083..15691
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W8E3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU10804.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15886..17847
DNA (1962bp) protein (654aa)
Quinate/shikimate dehydrogenase (Quinone) {ECO:0000313|EMBL:AKH42197.1}; EC=1.1.5.8 {ECO:0000313|EMBL:AKH42197.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2]
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WT8_SOLUE
scnpilot_p_inoc_scaffold_1219_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17847..18881
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKH41800.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1219_curated_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18878..19957
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKH42198.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1219_curated_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19960..21009
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKH41800.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1219_curated_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21015..22661
DNA (1647bp) protein (549aa)
Fumonisin B1 esterase {ECO:0000313|EMBL:AKH42199.1}; EC=3.1.1.87 {ECO:0000313|EMBL:AKH42199.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
carboxylesterase type b; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Lipase/esterase n=1 Tax=uncultured bacterium RepID=C7F9K0_9BACT
scnpilot_p_inoc_scaffold_1219_curated_21
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22778..23248
DNA (471bp) protein (157aa)
N-acetyltransferase GCN5; K03829 putative acetyltransferase [EC:2.3.1.-]
histone acetyltransferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B63901
Histone acetyltransferase {ECO:0000313|EMBL:KHJ53155.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
scnpilot_p_inoc_scaffold_1219_curated_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23352..23855)
DNA (504bp) protein (168aa)
Conserved hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42201.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23871..24464)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGH1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:AKH42202.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1219_curated_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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24624..24821
DNA (198bp) protein (66aa)
Quinate/shikimate dehydrogenase (Quinone) {ECO:0000313|EMBL:AKH42203.1}; EC=1.1.5.8 {ECO:0000313|EMBL:AKH42203.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Displaying 24 items

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