ggKbase home page

scnpilot_p_inoc_scaffold_790_curated

Search features with annotation key words

Displaying items 31-45 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_790_curated_31
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26734..27213)
DNA (480bp) protein (160aa)
Transcriptional regulator, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCD0_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:KEO87145.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_790_curated_32
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27246..27716)
DNA (471bp) protein (157aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTG5_9SPHN
scnpilot_p_inoc_scaffold_790_curated_33
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27979..28548)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLQ0_9SPHN
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33397.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
phosphoribosyltransferase
scnpilot_p_inoc_scaffold_790_curated_34
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28794..29543
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IPG9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93321.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_790_curated_35
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29596..32259)
DNA (2664bp) protein (888aa)
pyruvate,orthophosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate phosphate dikinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMA4_9SPHN
Pyruvate phosphate dikinase {ECO:0000313|EMBL:GAD49607.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_790_curated_36
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32321..34687)
DNA (2367bp) protein (789aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
glycyl-tRNA synthetase subunit beta n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ED8A
scnpilot_p_inoc_scaffold_790_curated_37
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34654..35577)
DNA (924bp) protein (308aa)
Glycine--tRNA ligase alpha subunit {ECO:0000313|EMBL:AKH41547.1}; EC=6.1.1.14 {ECO:0000313|EMBL:AKH41547.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
Glycine--tRNA ligase alpha subunit n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NAM7_ERYLH
scnpilot_p_inoc_scaffold_790_curated_38
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35696..36613
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JAD8_9SPHN
TraB family protein {ECO:0000313|EMBL:AKH41546.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09973 hypothetical protein
scnpilot_p_inoc_scaffold_790_curated_39
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36610..37512
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ71_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ58656.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein; K09973 hypothetical protein
scnpilot_p_inoc_scaffold_790_curated_40
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


37661..38278
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMA8_9SPHN
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25
scnpilot_p_inoc_scaffold_790_curated_41
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38371..38940
DNA (570bp) protein (190aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AKH41543.1}; EC=3.1.1.29 {ECO:0000313|EMBL:AKH41543.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCF5_9SPHN
scnpilot_p_inoc_scaffold_790_curated_42
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39377..39643
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ74_9SPHN
PEP-CTERM motif protein {ECO:0000313|EMBL:AKH41542.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_790_curated_43
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39796..40896
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A4D2_9SPHN
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942
scnpilot_p_inoc_scaffold_790_curated_44
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41008..42240
DNA (1233bp) protein (411aa)
phosphodiesterase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288C5B4
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:AKH41540.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
nucleotide pyrophosphatase family protein
scnpilot_p_inoc_scaffold_790_curated_45
unknown

Not on your lists

comp(42247..42354)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying items 31-45 of 45 in total

View Taxonomy