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scnpilot_p_inoc_scaffold_797_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_797_curated_1
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..254)
DNA (252bp) protein (84aa)
Putative hydratase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHF7_METPP
Hydratase {ECO:0000313|EMBL:EJZ35933.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hydratase
scnpilot_p_inoc_scaffold_797_curated_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

388..624
DNA (237bp) protein (79aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XET1_NOVAD
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ABP64442.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_797_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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635..2263
DNA (1629bp) protein (543aa)
Ribonuclease {ECO:0000313|EMBL:AKH42111.1}; EC=3.1.-.- {ECO:0000313|EMBL:AKH42111.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Beta-lactamase-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHG2_9SPHN
beta-lactamase-like protein; K07576 metallo-beta-lactamase family protein
scnpilot_p_inoc_scaffold_797_curated_4
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2270..2896)
DNA (627bp) protein (209aa)
Phosphoribosyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDX5_9SPHN
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:CCA90500.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_797_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3257..5743
DNA (2487bp) protein (829aa)
magnesium-transporting ATPase P-type; K01531 Mg2+-importing ATPase [EC:3.6.3.2]
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000371B6F5
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_p_inoc_scaffold_797_curated_6
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5746..6744
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H3C9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB10851.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
scnpilot_p_inoc_scaffold_797_curated_7
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6754..9561)
DNA (2808bp) protein (936aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E8D
TonB-dependent receptor {ECO:0000313|EMBL:EZP70323.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_797_curated_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9749..11680
DNA (1932bp) protein (644aa)
peptidase t2 asparaginase 2; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]
Peptidase t2 asparaginase 2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPI4_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_p_inoc_scaffold_797_curated_9
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11680..12126
DNA (447bp) protein (149aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A10
Transcriptional regulator, trmb {ECO:0000313|EMBL:EZP70325.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
transcriptional regulator, trmb
scnpilot_p_inoc_scaffold_797_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12147..12584)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000369F6C3
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:AKH42609.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_797_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12688..13854
DNA (1167bp) protein (389aa)
HlyD secretion family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUY0_9SPHN
Putative multidrug resistance protein EmrK {ECO:0000313|EMBL:AKH42610.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
scnpilot_p_inoc_scaffold_797_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13854..15428
DNA (1575bp) protein (525aa)
DSBA oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI00037FB9F1
Putative multidrug resistance protein EmrY {ECO:0000313|EMBL:AKH42611.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative MFS permease; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
scnpilot_p_inoc_scaffold_797_curated_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15437..16888
DNA (1452bp) protein (484aa)
RND transporter n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I565_9SPHN
Antibiotic efflux pump outer membrane protein ArpC {ECO:0000313|EMBL:AKH42612.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_797_curated_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17099..19102
DNA (2004bp) protein (668aa)
TonB-denpendent receptor n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GXG0_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KHS49306.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_797_curated_15
unknown

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19119..20303
DNA (1185bp) protein (395aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_797_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21769..25884)
DNA (4116bp) protein (1372aa)
Aerobic cobaltochelatase subunit CobN {ECO:0000313|EMBL:AKH42873.1}; EC=6.6.1.2 {ECO:0000313|EMBL:AKH42873.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Cobaltochelatase (EC:6.6.1.2); K02230 cobaltochelatase CobN [EC:6.6.1.2]
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3X3_9BACT
scnpilot_p_inoc_scaffold_797_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25862..26251)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHE9_AZOSU
Uncharacterized protein {ECO:0000313|EMBL:AKH42872.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_797_curated_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26251..26871)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036F15DF
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:AKH42871.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
biopolymer transport protein
scnpilot_p_inoc_scaffold_797_curated_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26868..27461)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH42870.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_797_curated_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27771..29360
DNA (1590bp) protein (530aa)
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit {ECO:0000313|EMBL:AKH44138.1}; EC=1.17.99.1 {ECO:0000313|EMBL:AKH44138.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EGQ9_9SPHN
FAD linked oxidase
scnpilot_p_inoc_scaffold_797_curated_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29357..29809
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GKC9_9SPHN
Cytochrome c6 {ECO:0000313|EMBL:AKH44137.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
cytochrome C class I
scnpilot_p_inoc_scaffold_797_curated_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29806..30210
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH44136.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_797_curated_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30215..31828
DNA (1614bp) protein (538aa)
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit {ECO:0000313|EMBL:AKH44135.1}; EC=1.17.99.1 {ECO:0000313|EMBL:AKH44135.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GRT2_9SPHN
pchF; p-cresol methylhydroxylase subunit
scnpilot_p_inoc_scaffold_797_curated_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31825..32262
DNA (438bp) protein (146aa)
Probable p-cresol methylhydroxylase subunit n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8T3_AROAE
Cytochrome c6 {ECO:0000313|EMBL:AKH44134.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
pchC; p-cresol methylhydroxylase subunit
scnpilot_p_inoc_scaffold_797_curated_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32272..33123)
DNA (852bp) protein (284aa)
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5K2_NOVAD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABD26871.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_797_curated_26
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33216..34385
DNA (1170bp) protein (390aa)
p-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2); K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
p-hydroxybenzoate 3-monooxygenase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L935_9SPHN
p-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:EIZ81004.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
scnpilot_p_inoc_scaffold_797_curated_27
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34560..36827
DNA (2268bp) protein (756aa)
UPI0003CFD657 related cluster n=1 Tax=unknown RepID=UPI0003CFD657
hypothetical protein; K07278 outer membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_797_curated_28
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36827..41068
DNA (4242bp) protein (1414aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000303DC42
hypothetical protein; K09800 hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_797_curated_29
unknown

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41070..41264
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 29 items

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