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scnpilot_p_inoc_scaffold_1431_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1431_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..138
DNA (138bp) protein (46aa)
ahcY; adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Adenosylhomocysteinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIB2_9SPHN
scnpilot_p_inoc_scaffold_1431_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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235..2577
DNA (2343bp) protein (781aa)
Sensor protein DivL {ECO:0000313|EMBL:AKH41764.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AKH41764.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative two-component histidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJM2_9SPHN
two-component signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1431_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2574..3017
DNA (444bp) protein (148aa)
ATPase, YjeE family n=1 Tax=Novosphingobium sp. AP12 RepID=J2PKU4_9SPHN
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE {ECO:0000313|EMBL:AKH41763.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K06925 UPF0079 ATP-binding protein
scnpilot_p_inoc_scaffold_1431_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3014..3997
DNA (984bp) protein (328aa)
Putative phosphotransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ28_9SPHN
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:AKH41762.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aminoglycoside phosphotransferase; K07102
scnpilot_p_inoc_scaffold_1431_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3994..4710
DNA (717bp) protein (239aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F70A8D
Bifunctional IPC transferase and DIPP synthase {ECO:0000313|EMBL:AKH41761.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
nucleotidyltransferase
scnpilot_p_inoc_scaffold_1431_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4703..7759
DNA (3057bp) protein (1019aa)
Double-strand break repair protein AddB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0V4_9SPHN
Double-strand break repair protein AddB {ECO:0000313|EMBL:GAD48383.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
helicase
scnpilot_p_inoc_scaffold_1431_curated_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7756..11211
DNA (3456bp) protein (1152aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Double-strand break repair helicase AddA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJL9_9SPHN
ATP-dependent exonuclease V subunit beta
scnpilot_p_inoc_scaffold_1431_curated_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11289..11609
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6T8_NOVAD
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_1431_curated_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12102..12908)
DNA (807bp) protein (269aa)
Inositol monophosphatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6T9_NOVAD
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ABD26434.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_1431_curated_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12905..14143)
DNA (1239bp) protein (413aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6U1_NOVAD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_1431_curated_11
unknown

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14257..14529
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1431_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14636..17383
DNA (2748bp) protein (916aa)
Protein translocase subunit SecA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EI22_9SPHN
Preprotein translocase subunit SecA {ECO:0000313|EMBL:AKH41754.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
scnpilot_p_inoc_scaffold_1431_curated_13
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17466..18344
DNA (879bp) protein (293aa)
Gluconolactonase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AP24_9SPHN
Gluconolactonase {ECO:0000313|EMBL:EJL34394.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
SMP-30/Gluconolaconase/LRE domain-containing protein
scnpilot_p_inoc_scaffold_1431_curated_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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18360..19553
DNA (1194bp) protein (398aa)
Arabinose efflux permease family protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E7H2_CAUCE
Tetracycline resistance protein, class B {ECO:0000313|EMBL:AKH41753.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_1431_curated_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19615..20349
DNA (735bp) protein (245aa)
Putative methyltransferase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CVC1_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:AKH41750.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1431_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20576..20821)
DNA (246bp) protein (82aa)
Putative inorganic polyphosphate/ATP-NAD kinase {ECO:0000313|EMBL:AKH41749.1}; EC=2.7.1.23 {ECO:0000313|EMBL:AKH41749.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23]
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EA8F
Displaying 16 items

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