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scnpilot_p_inoc_scaffold_4199_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4199_curated_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..204
DNA (204bp) protein (68aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Putative glutathione S-transferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A064_9SPHN
Putative glutathione S-transferase {ECO:0000313|EMBL:GAD48168.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_4199_curated_2
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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231..677
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IFW6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58843.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_p_inoc_scaffold_4199_curated_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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731..1357
DNA (627bp) protein (209aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Putative glutathione S-transferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIJ8_9SPHN
Putative glutathione S-transferase {ECO:0000313|EMBL:GAD48165.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_4199_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1372..1998)
DNA (627bp) protein (209aa)
DnaJ-class molecular chaperone n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCH1_ERYLH
Chaperone protein DnaJ {ECO:0000313|EMBL:AKH42066.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
molecular chaperone DnaJ
scnpilot_p_inoc_scaffold_4199_curated_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2050..2328
DNA (279bp) protein (93aa)
Putative BolA-like protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ24_9SPHN
Putative BolA-like protein {ECO:0000313|EMBL:GAD48172.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
BolA protein; K05527 BolA protein
scnpilot_p_inoc_scaffold_4199_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2325..3218
DNA (894bp) protein (298aa)
Pirin-related protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A070_9SPHN
Pirin-related protein {ECO:0000313|EMBL:GAD48173.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
pirin; K06911
scnpilot_p_inoc_scaffold_4199_curated_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3223..4509
DNA (1287bp) protein (429aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B51F9A
Transmembrane protein {ECO:0000313|EMBL:GAO56748.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
low temperature requirement A
scnpilot_p_inoc_scaffold_4199_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4506..5597)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G470_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH42071.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4199_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5633..6286
DNA (654bp) protein (218aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIK7_9SPHN
scnpilot_p_inoc_scaffold_4199_curated_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6286..7572
DNA (1287bp) protein (429aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4X7_9SPHN
scnpilot_p_inoc_scaffold_4199_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7569..8021
DNA (453bp) protein (151aa)
N utilization substance protein B homolog n=2 Tax=Novosphingobium RepID=F6IFX0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42074.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
transcription termination factor; K03625 N utilization substance protein B
Displaying 11 items

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