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scnpilot_p_inoc_scaffold_3351_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3351_curated_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1208
DNA (1206bp) protein (402aa)
Peptidase U62 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A1N3_9SPHN
Peptidase U62 family protein {ECO:0000313|EMBL:GAD48668.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
TldD protein; K03568 TldD protein
scnpilot_p_inoc_scaffold_3351_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1565..1969
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK63_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48667.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1978..2532
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y684_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48666.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2620..4074
DNA (1455bp) protein (485aa)
Alkaline phosphatase {ECO:0000313|EMBL:AKH43072.1}; EC=3.1.3.1 {ECO:0000313|EMBL:AKH43072.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
alkaline phosphatase; K01077 alkaline phosphatase [EC:3.1.3.1]
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IED2_9SPHN
scnpilot_p_inoc_scaffold_3351_curated_5
bacterium YEK0313, Bacteria

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comp(4088..4771)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPM5_9SPHN
DNA alkylation repair enzyme {ECO:0000313|EMBL:CEJ14942.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4775..5185)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A763_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL96610.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_7
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5208..5660)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4QKI9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ79668.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
marR; transcriptional regulator
scnpilot_p_inoc_scaffold_3351_curated_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5730..6176)
DNA (447bp) protein (149aa)
Acetyltransferase, GNAT family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZY45_9PROT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM02093.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
GCN5-like N-acetyltransferase
scnpilot_p_inoc_scaffold_3351_curated_9
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6237..6812)
DNA (576bp) protein (192aa)
NADPH-dependent FMN reductase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JBW3_9SPHN
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EQB19344.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
NADPH-dependent FMN reductase
scnpilot_p_inoc_scaffold_3351_curated_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6902..7537)
DNA (636bp) protein (212aa)
DedA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3M2_NOVAD
hypothetical protein
DedA {ECO:0000313|EMBL:ABD27551.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_3351_curated_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7829..8356
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDK4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54951.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_12
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8346..8840
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P2D0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL21092.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8800..9204
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y7B2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43475.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3351_curated_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9268..9819
DNA (552bp) protein (184aa)
superoxide dismutase (Cu/Zn); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL42_9SPHN
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:GAD49082.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_3351_curated_15
unknown

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comp(9834..9977)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 15 items

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