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scnpilot_p_inoc_scaffold_2452_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2452_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31..411)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000312AE0D
Glyoxalase-like domain protein {ECO:0000313|EMBL:AKH43808.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_2452_curated_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(453..1565)
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
S-(hydroxymethyl)glutathione dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
alcohol dehydrogenase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000373C981
scnpilot_p_inoc_scaffold_2452_curated_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1648..3018)
DNA (1371bp) protein (457aa)
Putative aromatic acid transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQU1_9SPHN
Putative aromatic acid transporter {ECO:0000313|EMBL:KHS48822.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
putative aromatic acid transporter
scnpilot_p_inoc_scaffold_2452_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3047..3514)
DNA (468bp) protein (156aa)
Transcriptional regulator, MarR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA75_NOVAD
Transcriptional regulator HosA {ECO:0000313|EMBL:AKH43812.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_2452_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3578..5047
DNA (1470bp) protein (490aa)
Lignostilbene-alpha,beta-dioxygenase isozyme III {ECO:0000313|EMBL:AKH43813.1}; EC=1.13.11.43 {ECO:0000313|EMBL:AKH43813.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Carotenoid oxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA76_NOVAD
carotenoid oxygenase; K11159 carotenoid cleavage dioxygenase
scnpilot_p_inoc_scaffold_2452_curated_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5073..6326
DNA (1254bp) protein (418aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46); K01453 [EC:3.5.1.46]
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:ABD24663.1}; EC=3.5.1.46 {ECO:0000313|EMBL:ABD24663.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
6-aminohexanoate-dimer hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBW0_NOVAD
scnpilot_p_inoc_scaffold_2452_curated_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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6433..7227
DNA (795bp) protein (265aa)
N-Acetylglucosamine-6-Phosphatase, Protein nagD n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2U8_MODMB
nagD; N-Acetylglucosamine-6-Phosphatase, Protein nagD
N-Acetylglucosamine-6-Phosphatase, Protein nagD {ECO:0000313|EMBL:CCH89961.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_p_inoc_scaffold_2452_curated_8
unknown

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comp(7243..7698)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2452_curated_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7695..9356)
DNA (1662bp) protein (554aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:AKH43815.1}; EC=1.1.99.- {ECO:0000313|EMBL:AKH43815.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Choline dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT6_9SPHN
choline dehydrogenase
scnpilot_p_inoc_scaffold_2452_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9446..9928
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4FD85
Uncharacterized protein {ECO:0000313|EMBL:AKH43816.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2452_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10131..11402
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1B1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AKH43918.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_2452_curated_12
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11633..12610)
DNA (978bp) protein (326aa)
Membrane carboxypeptidase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7I0_ERYLH
membrane carboxypeptidase
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
Displaying 12 items

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