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scnpilot_p_inoc_scaffold_8714_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_8714_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..390
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6M9_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH41580.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09796 hypothetical protein
scnpilot_p_inoc_scaffold_8714_curated_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(878..1150)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SAM8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS49013.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
scnpilot_p_inoc_scaffold_8714_curated_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1339..2016
DNA (678bp) protein (226aa)
Isochorismatase hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6M6_NOVAD
Isochorismatase hydrolase {ECO:0000313|EMBL:KHS49014.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
isochorismatase hydrolase
scnpilot_p_inoc_scaffold_8714_curated_4
unknown

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2187..2462
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_8714_curated_5
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2472..3041)
DNA (570bp) protein (190aa)
Protein GrpE n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ38_9SPHN
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
molecular chaperone GrpE; K03687 molecular chaperone GrpE
scnpilot_p_inoc_scaffold_8714_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3060..4115)
DNA (1056bp) protein (352aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A494_9SPHN
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
heat-inducible transcriptional repressor; K03705 heat-inducible transcriptional repressor
scnpilot_p_inoc_scaffold_8714_curated_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4159..4671)
DNA (513bp) protein (171aa)
putative signal peptide n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD05AF
Uncharacterized protein {ECO:0000313|EMBL:AJP73012.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_8714_curated_8
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4777..5166
DNA (390bp) protein (130aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56]
UPI0003CFC0C1 related cluster n=1 Tax=unknown RepID=UPI0003CFC0C1
Displaying 8 items

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