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scnpilot_p_inoc_scaffold_2105_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2105_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(384..941)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKQ3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43912.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2105_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(938..1369)
DNA (432bp) protein (144aa)
Putative cytochrome c n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKQ4_9SPHN
4-cresol dehydrogenase [hydroxylating] cytochrome c subunit {ECO:0000313|EMBL:AKH43911.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative cytochrome c
scnpilot_p_inoc_scaffold_2105_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1366..2928)
DNA (1563bp) protein (521aa)
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit {ECO:0000313|EMBL:AKH43910.1}; EC=1.17.99.1 {ECO:0000313|EMBL:AKH43910.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
FAD-linked oxidase n=1 Tax=Sphingobium xenophagum RepID=UPI00030DAE57
FAD linked oxidase-like protein
scnpilot_p_inoc_scaffold_2105_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2973..3737)
DNA (765bp) protein (255aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:AKH43909.1}; EC=1.1.1.69 {ECO:0000313|EMBL:AKH43909.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
3-hydroxyacyl-CoA dehydrogenase FadB2x n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT32_9SPHN
scu; 3-hydroxyacyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_2105_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3872..4744
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKR7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43908.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2105_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4741..5937
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000362DB29
4-hydroxybenzoate transporter PcaK {ECO:0000313|EMBL:AKH43907.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative aromatic acid transporter; K08195 MFS transporter, AAHS family, 4-hydroxybenzoate transporter
scnpilot_p_inoc_scaffold_2105_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5944..6387)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP9_9SPHN
Nuclear transport factor 2 (NTF2) domain protein {ECO:0000313|EMBL:AKH43906.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2105_curated_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6377..7429)
DNA (1053bp) protein (351aa)
putative iron-sulfur protein; K03862 vanillate monooxygenase [EC:1.14.13.82]
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000380DCE7
Putative iron-sulfur protein {ECO:0000313|EMBL:EZP71096.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
scnpilot_p_inoc_scaffold_2105_curated_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7531..8082
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030B5647
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:BAK65198.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_2105_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8101..8613)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037DA772
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:AKH43905.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_2105_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8787..10277
DNA (1491bp) protein (497aa)
Lignostilbene-alpha,beta-dioxygenase isozyme I {ECO:0000313|EMBL:AKH43904.1}; EC=1.13.11.43 {ECO:0000313|EMBL:AKH43904.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKS0_9SPHN
putative dioxygenase
scnpilot_p_inoc_scaffold_2105_curated_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10331..10897)
DNA (567bp) protein (189aa)
Putative TetR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=E1CJ69_9SPHN
TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAJ11990.1}; TetR family transcriptional regulator {ECO:0000313|EMBL:BAK67936.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_2105_curated_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10967..12001
DNA (1035bp) protein (345aa)
putative iron-sulfur protein; K03862 vanillate monooxygenase [EC:1.14.13.82]
Putative iron-sulfur protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INF8_9SPHN
Putative iron-sulfur protein {ECO:0000313|EMBL:BAK67937.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_2105_curated_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12080..12583)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEW5_METPP
Uncharacterized protein {ECO:0000313|EMBL:AKH43901.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2105_curated_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12715..13104)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP25_9SPHN
SnoaL-like domain protein {ECO:0000313|EMBL:AKH43900.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2105_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13116..13643)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43899.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2105_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13643..14383)
DNA (741bp) protein (247aa)
Levodione reductase {ECO:0000313|EMBL:AKH43898.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH43898.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031D1903
short-chain dehydrogenase/reductase SDR
Displaying 17 items

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