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scnpilot_p_inoc_scaffold_1625_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1625_curated_1
unknown

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comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1625_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106..1155)
DNA (1050bp) protein (350aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:AKH44226.1}; EC=2.7.9.2 {ECO:0000313|EMBL:AKH44226.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K01007 pyruvate, water dikinase [EC:2.7.9.2]
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM73_9SPHN
scnpilot_p_inoc_scaffold_1625_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1160..3001)
DNA (1842bp) protein (614aa)
hypothetical protein; K01007 pyruvate, water dikinase [EC:2.7.9.2]
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM74_9SPHN
Chondramide synthase cmdD {ECO:0000313|EMBL:AKH44227.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1625_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3162..4202)
DNA (1041bp) protein (347aa)
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM75_9SPHN
Transcriptional activator NphR {ECO:0000313|EMBL:AKH44228.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1625_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4508..5494)
DNA (987bp) protein (329aa)
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM75_9SPHN
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAK65330.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1625_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5515..6357)
DNA (843bp) protein (281aa)
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5N2_NOVAD
Beta-etherase {ECO:0000313|EMBL:AKH42187.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
glutathione S-transferase-like protein
scnpilot_p_inoc_scaffold_1625_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6442..7188)
DNA (747bp) protein (249aa)
3'-phosphoadenosine 5'-phosphate phosphatase {ECO:0000313|EMBL:AKH44004.1}; EC=3.1.3.7 {ECO:0000313|EMBL:AKH44004.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
inositol monophosphatase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
MFS transporter n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002D6D894
scnpilot_p_inoc_scaffold_1625_curated_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7199..7447)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G384_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27689.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_1625_curated_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7475..9412)
DNA (1938bp) protein (646aa)
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4); K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
Adenylylsulfate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G385_NOVAD
Bifunctional enzyme CysN/CysC {ECO:0000313|EMBL:AKH44005.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1625_curated_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9412..10314)
DNA (903bp) protein (301aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
cysD; sulfate adenylyltransferase subunit 2; K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 2 n=3 Tax=Sphingobium RepID=D4Z7F3_SPHJU
scnpilot_p_inoc_scaffold_1625_curated_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10724..11500)
DNA (777bp) protein (259aa)
Short chain enoyl-CoA hydratase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2L9_9SPHN
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAO40758.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
short chain enoyl-CoA hydratase
scnpilot_p_inoc_scaffold_1625_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11514..12563)
DNA (1050bp) protein (350aa)
Carnitinyl-CoA dehydratase {ECO:0000313|EMBL:AKH44007.1}; EC=4.2.1.- {ECO:0000313|EMBL:AKH44007.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAX3_9SPHN
enoyl-CoA hydratase/isomeras
scnpilot_p_inoc_scaffold_1625_curated_13
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12586..12903)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DFI8_SPHYA
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_p_inoc_scaffold_1625_curated_14
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12917..13387)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2PC62_9SPHN
Scaffold34, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30122.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1625_curated_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13472..13855)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N895_ERYLH
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKH44010.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1625_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14030..14980
DNA (951bp) protein (317aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase {ECO:0000313|EMBL:AKH44014.1}; EC=1.14.11.- {ECO:0000313|EMBL:AKH44014.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003196D77
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
scnpilot_p_inoc_scaffold_1625_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14984..16975)
DNA (1992bp) protein (664aa)
hypothetical protein; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NB62_ERYLH
Acetyl-/propionyl-coenzyme A carboxylase alpha chain {ECO:0000313|EMBL:AKH44213.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_1625_curated_18
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16957..17814)
DNA (858bp) protein (286aa)
UPI0003D045EA related cluster n=1 Tax=unknown RepID=UPI0003D045EA
esterase; K07017
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_1625_curated_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17811..18248)
DNA (438bp) protein (146aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AKH44218.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AKH44218.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z5F0_9SPHN
Displaying 19 items

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