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scnpilot_p_inoc_scaffold_1430_curated

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1430_curated_31
Gluconobacter thailandicus, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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23144..24472
DNA (1329bp) protein (443aa)
DNA-damage-inducible protein D n=2 Tax=Gluconobacter thailandicus RepID=M9M5J1_GLUTH
DNA-damage-inducible protein D {ECO:0000313|EMBL:GAC87781.1}; TaxID=1291534 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter thailandicus NBRC 3255.;"
dinD; DNA-damage-inducible protein d; K14623 DNA-damage-inducible protein D
scnpilot_p_inoc_scaffold_1430_curated_32
unknown

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24784..25131
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_33
unknown

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comp(25178..25969)
DNA (792bp) protein (264aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_34
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25992..26492)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HH31_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96828.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_35
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26757..27035
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2Y4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81902.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_36
unknown

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27235..27438
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_37
unknown

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27435..27830
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_38
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27827..28237
DNA (411bp) protein (137aa)
UPI0003D05A54 related cluster n=1 Tax=unknown RepID=UPI0003D05A54
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_1430_curated_39
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28239..28475
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IJH9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHK92432.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
scnpilot_p_inoc_scaffold_1430_curated_40
unknown

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28475..28684
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_41
unknown

Not on your lists

28681..28893
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_42
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28991..29296
DNA (306bp) protein (102aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
LexA repressor n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GF51_9SPHN
scnpilot_p_inoc_scaffold_1430_curated_43
unknown

Not on your lists

29306..29560
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_44
unknown

Not on your lists

29626..29778
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1430_curated_45
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29775..30854
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000370F238
integrase family protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
scnpilot_p_inoc_scaffold_1430_curated_46
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31306..32319
DNA (1014bp) protein (338aa)
Exopolyphosphatase {ECO:0000313|EMBL:AKH42642.1}; EC=3.6.1.11 {ECO:0000313|EMBL:AKH42642.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Putative exopolyphosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y7Q3_9SPHN
scnpilot_p_inoc_scaffold_1430_curated_47
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32316..32978
DNA (663bp) protein (221aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RLME_NOVAD rbh
scnpilot_p_inoc_scaffold_1430_curated_48
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33258..33887)
DNA (630bp) protein (210aa)
Putative cytochrome c n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZV26_9SPHN
Putative cytochrome c {ECO:0000313|EMBL:GAD49234.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
cytochrome c; K08738 cytochrome c
scnpilot_p_inoc_scaffold_1430_curated_49
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34003..34896
DNA (894bp) protein (298aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Putative prephenate dehydratase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3A3_9SPHN
Putative prephenate dehydratase {ECO:0000313|EMBL:GAD49233.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1430_curated_50
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34967..35653
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLF7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49232.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_51
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35650..36957
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y7P8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42647.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_52
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36954..37916
DNA (963bp) protein (321aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
Putative regulatory protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKX0_9SPHN
Putative regulatory protein {ECO:0000313|EMBL:GAD49230.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1430_curated_53
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37921..39240
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZV20_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49229.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_54
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39401..40456
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A398_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42650.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_55
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40453..41343
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLF4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49227.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1430_curated_56
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41340..41876
DNA (537bp) protein (179aa)
Putative acetyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKW4_9SPHN
Putative acetyltransferase {ECO:0000313|EMBL:GAD49225.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_1430_curated_57
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41957..42172
DNA (216bp) protein (72aa)
Putative endonuclease containing a URI domain n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZQR0_9SPHN
Putative endonuclease containing a URI domain {ECO:0000313|EMBL:EJL21144.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
scnpilot_p_inoc_scaffold_1430_curated_58
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42303..44063)
DNA (1761bp) protein (587aa)
sodium/hydrogen exchanger n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037479F1
Sodium:proton exchanger {ECO:0000313|EMBL:AIT07918.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family
scnpilot_p_inoc_scaffold_1430_curated_59
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44225..45118
DNA (894bp) protein (298aa)
Putative gluconolactonase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJJ4_9SPHN
putative gluconolactonase
Putative gluconolactonase {ECO:0000313|EMBL:BAK64864.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1430_curated_60
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45178..46317
DNA (1140bp) protein (380aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=uncultured bacterium WWRS-2005 RepID=Q1I1A5_9BACT
Displaying items 31-60 of 63 in total

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