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scnpilot_p_inoc_scaffold_1430_curated_47

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 32316..32978

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 220.0
  • Bit_score: 389
  • Evalue 2.30e-105
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 220.0
  • Bit_score: 387
  • Evalue 3.30e-105
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RLME_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 220.0
  • Bit_score: 387
  • Evalue 1.10e-104
  • rbh

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GTGACCCGTTCCGGACGCAATCCCGAAAAGCGGGTCAAAACCGCGCGAGGCCGCACGGCCTCTTCGAATCGCTGGCTGTCGCGCCAGCTCAACGATCCATATGTGAAGCAGGCCAAGGCAGAAGGCTATCGCAGCCGGGCGGCCTACAAGTTGATCGAGCTGGACGAGAAATTCGCCCTGCTGAAGGGGGCGCAGCGCGTGGTGGACCTGGGCATCGCGCCCGGCGGCTGGAGCCAGGTGGTGCGCAAGATCGCGCCCCGCGCGGCCATTGTCGGGATCGACCTGTTGCCCACGGACCCCATAGAGGGCGTGACCATCTTCCAGATGGACTTCATGGCCGACGAAGCGCCGGAAGCGCTGGAAGGGGCGCTGGATGGCCCTCCCGACCTCGTCCTGTCGGACATGGCGGCAAACACCGTGGGCCATAAGCAGACGGACCATCTGCGCACCATGGGGCTGGTGGAAACCGCCGTCGACTTCGCGATCCAGACTCTGGCGCCGGGCGGAGCTTTCGTGGCCAAGGTCTTCGCAGGCGGCACCGATCCTGCGTTGCTGACATTGCTCAAGCAGAACTTCACCACGGTGAAGCACGCCAAGCCTCCTGCCAGCCGCAAGGGCTCTTCCGAATGGTATGTAATCGCGCAGGGCTTCAAGGGGCGTTGA
PROTEIN sequence
Length: 221
VTRSGRNPEKRVKTARGRTASSNRWLSRQLNDPYVKQAKAEGYRSRAAYKLIELDEKFALLKGAQRVVDLGIAPGGWSQVVRKIAPRAAIVGIDLLPTDPIEGVTIFQMDFMADEAPEALEGALDGPPDLVLSDMAANTVGHKQTDHLRTMGLVETAVDFAIQTLAPGGAFVAKVFAGGTDPALLTLLKQNFTTVKHAKPPASRKGSSEWYVIAQGFKGR*