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scnpilot_p_inoc_scaffold_4259_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4259_curated_1
unknown

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1..84
DNA (84bp) protein (28aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_4259_curated_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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84..1892
DNA (1809bp) protein (603aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRN8_9SPHN
scnpilot_p_inoc_scaffold_4259_curated_3
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1987..3738
DNA (1752bp) protein (584aa)
Acyltransferase 3 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VE18_9RHOB
acyltransferase 3
Tax=BJP_08E140C01_Actinomycetales_67_18
scnpilot_p_inoc_scaffold_4259_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3748..4422)
DNA (675bp) protein (225aa)
Peptidyl-prolyl cis-trans isomerase cyp18 {ECO:0000313|EMBL:AKH41331.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AKH41331.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
peptidyl-prolyl cis-trans isomerase A; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase A n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P814_9SPHN
scnpilot_p_inoc_scaffold_4259_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4419..5597)
DNA (1179bp) protein (393aa)
L-lactate dehydrogenase {ECO:0000313|EMBL:AKH41335.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AKH41335.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
lactate dehydrogenase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4922F
hypothetical protein
scnpilot_p_inoc_scaffold_4259_curated_6
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5837..6238
DNA (402bp) protein (134aa)
Transcriptional regulator, BlaI family, putative n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P812_9SPHN
Putative transcriptional regulator {ECO:0000313|EMBL:EZP83826.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
putative transcriptional regulator; K07737 putative transcriptional regulator
scnpilot_p_inoc_scaffold_4259_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6235..7881
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD08C0
Regulatory protein BlaR1 {ECO:0000313|EMBL:AKH41337.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
Displaying 7 items

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