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scnpilot_p_inoc_scaffold_6432_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6432_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..888)
DNA (888bp) protein (296aa)
High-affinity iron transporter n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEU7_9MICO
Iron permease FTR1 {ECO:0000313|EMBL:EXJ51119.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
high-affinity Fe2+/Pb2+ permease; K07243 high-affinity iron transporter
scnpilot_p_inoc_scaffold_6432_curated_2
unknown

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comp(956..1102)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_6432_curated_3
unknown

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comp(1104..1862)
DNA (759bp) protein (253aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_6432_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2174..3232
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRJ2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47984.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_6432_curated_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3229..4467
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IH34_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB08949.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_6432_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4894..5994
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIP1_9SPHN
Transmembrane exosortase {ECO:0000313|EMBL:AKH41710.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ABC transporter
scnpilot_p_inoc_scaffold_6432_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6006..7904
DNA (1899bp) protein (633aa)
Asparagine synthetase [glutamine-hydrolyzing] 1 {ECO:0000313|EMBL:AKH41709.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AKH41709.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NA36_ERYLH
scnpilot_p_inoc_scaffold_6432_curated_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8106..9068
DNA (963bp) protein (321aa)
enoyl-CoA hydratase (EC:4.2.1.17); K13816 DSF synthase
Putative enoyl-CoA hydratase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI67_9SPHN
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:GAD47980.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_6432_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9075..10208)
DNA (1134bp) protein (378aa)
Putative ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRI8_9SPHN
Putative ATPase {ECO:0000313|EMBL:GAD47979.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein; K06916
scnpilot_p_inoc_scaffold_6432_curated_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10208..10645)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000313EA43
Uncharacterized protein {ECO:0000313|EMBL:KGM34301.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
glutathione-dependent formaldehyde-activating GFA
scnpilot_p_inoc_scaffold_6432_curated_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10650..11264)
DNA (615bp) protein (205aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIN7_9SPHN
Displaying 11 items

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