ggKbase home page

scnpilot_p_inoc_scaffold_7048_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_7048_curated_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..648)
DNA (648bp) protein (216aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
Amidophosphoribosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7H0_NOVAD
scnpilot_p_inoc_scaffold_7048_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1068..2021
DNA (954bp) protein (318aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH40_9SPHN
scnpilot_p_inoc_scaffold_7048_curated_3
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2036..2494)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EI60_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_7048_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2843..3055)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXU6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41414.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_7048_curated_5
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3059..3658)
DNA (600bp) protein (200aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5E2D9
5-formyltetrahydrofolate cyclo-ligase
scnpilot_p_inoc_scaffold_7048_curated_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3898..4215)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDL2_9SPHN
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein; K09888 cell division protein ZapA
scnpilot_p_inoc_scaffold_7048_curated_7
unknown

Not on your lists

comp(4212..4418)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_7048_curated_8
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4642..5994
DNA (1353bp) protein (451aa)
Transketolase {ECO:0000313|EMBL:KEO87020.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KEO87020.1};; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCT0_9SPHN
Displaying 8 items

View Taxonomy