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scnpilot_p_inoc_scaffold_6582_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6582_curated_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..626
DNA (624bp) protein (208aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCY8_9SPHN
scnpilot_p_inoc_scaffold_6582_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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729..2210
DNA (1482bp) protein (494aa)
Peptidase M48 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0W5_9SPHN
Peptidase M48 family protein {ECO:0000313|EMBL:GAD48398.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_6582_curated_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2348..2524)
DNA (177bp) protein (59aa)
pilin n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ED7E
Pilin {ECO:0000313|EMBL:KEO98766.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
hypothetical protein; K02651 pilus assembly protein Flp/PilA
scnpilot_p_inoc_scaffold_6582_curated_4
unknown

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comp(2623..2856)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_6582_curated_5
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2881..3318
DNA (438bp) protein (146aa)
7,8-dihydro-8-oxoguanine-triphosphatase (EC:3.6.1.-)
Mutator mutT protein, hypothetical n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6S9_9SPHN
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_6582_curated_6
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3638..4129
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6T2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL50033.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
scnpilot_p_inoc_scaffold_6582_curated_7
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4230..4805
DNA (576bp) protein (192aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EI04_9SPHN
scnpilot_p_inoc_scaffold_6582_curated_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4887..5366)
DNA (480bp) protein (160aa)
Alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG56_9SPHN
Peroxiredoxin {ECO:0000313|EMBL:GAO55988.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
alkyl hydroperoxide reductase
scnpilot_p_inoc_scaffold_6582_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5659..6234
DNA (576bp) protein (192aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1]
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B44BC1
Displaying 9 items

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