ggKbase home page

scnpilot_p_inoc_scaffold_7457_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_7457_curated_1
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..963
DNA (963bp) protein (321aa)
glutamate--cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate--cysteine ligase, plant type n=1 Tax=Novosphingobium sp. AP12 RepID=J2G3E1_9SPHN
Glutamate--cysteine ligase, plant type {ECO:0000313|EMBL:EJL24145.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
scnpilot_p_inoc_scaffold_7457_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

963..1268
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHK6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47635.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
antibiotic biosynthesis monooxygenase
scnpilot_p_inoc_scaffold_7457_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1270..2637)
DNA (1368bp) protein (456aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II26_9SPHN
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein {ECO:0000313|EMBL:AKH42295.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_p_inoc_scaffold_7457_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2714..4057)
DNA (1344bp) protein (448aa)
Outer membrane protein assembly factor BamB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ8_9SPHN
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_7457_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4081..4704)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYN5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42297.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_7457_curated_6
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5032..5721)
DNA (690bp) protein (230aa)
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L3I5_9SPHN
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EIZ78859.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_7457_curated_7
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..6915)
DNA (867bp) protein (289aa)
Putative hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHL0_9SPHN
Alpha/beta hydrolase {ECO:0000313|EMBL:KHL26852.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_7457_curated_8
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6979..8241
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9T8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KEO88368.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
scnpilot_p_inoc_scaffold_7457_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8338..12732)
DNA (4395bp) protein (1465aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AA81_STAND
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ADH90868.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Displaying 9 items

View Taxonomy