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scnpilot_p_inoc_scaffold_7880_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_7880_curated_1
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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68..1435
DNA (1368bp) protein (456aa)
Major facilitator superfamily protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEC8_GEMAT
Nitrate/nitrite transporter {ECO:0000313|EMBL:GAM98626.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_7880_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1511..1945
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMS7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67866.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_7880_curated_3
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1964..2920)
DNA (957bp) protein (319aa)
50S ribosomal protein L20 (EC:2.1.1.-); K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIS6_9SPHN
ScaffoldA10, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29765.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
scnpilot_p_inoc_scaffold_7880_curated_4
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2917..3816)
DNA (900bp) protein (300aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Novosphingobium sp. AP12 RepID=J2P9E8_9SPHN
ScaffoldA10, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29764.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
beta-lactamase-like protein
scnpilot_p_inoc_scaffold_7880_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3844..4572)
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:AKH41327.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AKH41327.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P819_9SPHN
3-oxoacyl-ACP reductase
scnpilot_p_inoc_scaffold_7880_curated_6
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4756..5136
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9W6_ERYLH
hypothetical protein; K00241 succinate dehydrogenase cytochrome b556 subunit
Uncharacterized protein {ECO:0000313|EMBL:ABC63525.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
scnpilot_p_inoc_scaffold_7880_curated_7
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5150..5506
DNA (357bp) protein (119aa)
succinate dehydrogenase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7D2
succinate dehydrogenase hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase hydrophobic membrane anchor protein {ECO:0000313|EMBL:ABC63524.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
Displaying 7 items

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