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scnpilot_p_inoc_scaffold_2705_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2705_curated_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..603
DNA (603bp) protein (201aa)
Putative ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYA6_9SPHN
Putative ATPase {ECO:0000313|EMBL:GAD47513.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
cell division cycle protein; K13525 transitional endoplasmic reticulum ATPase
scnpilot_p_inoc_scaffold_2705_curated_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(705..1736)
DNA (1032bp) protein (344aa)
Small-conductance mechanosensitive channel n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5T4_ERYLH
small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ABC64957.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
scnpilot_p_inoc_scaffold_2705_curated_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1733..2746)
DNA (1014bp) protein (338aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I {ECO:0000313|EMBL:ABD24726.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABD24726.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
DNA polymerase I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBP7_NOVAD
scnpilot_p_inoc_scaffold_2705_curated_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2697..4409)
DNA (1713bp) protein (571aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBP7_NOVAD
DNA polymerase {ECO:0000313|EMBL:KHK89503.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
scnpilot_p_inoc_scaffold_2705_curated_5
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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4684..4911
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eimeria mitis RepID=U6JWC6_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ29724.1}; TaxID=44415 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria mitis.;"
scnpilot_p_inoc_scaffold_2705_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5335..6363)
DNA (1029bp) protein (343aa)
Extended-spectrum beta-lactamase PER-1 {ECO:0000313|EMBL:AKH43652.1}; EC=3.5.2.6 {ECO:0000313|EMBL:AKH43652.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
beta-lactamase (EC:3.5.2.6)
Putative beta-lactamase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQ63_9SPHN
scnpilot_p_inoc_scaffold_2705_curated_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6597..8234)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYA0_9SPHN
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
groEL; chaperonin GroEL
scnpilot_p_inoc_scaffold_2705_curated_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8332..8619)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHS9_9SPHN
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
molecular chaperone GroES; K04078 chaperonin GroES
scnpilot_p_inoc_scaffold_2705_curated_9
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8769..10148)
DNA (1380bp) protein (460aa)
Multidrug resistance protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHB1_9SPHN
multidrug resistance protein; K03327 multidrug resistance protein, MATE family
Multidrug resistance protein {ECO:0000313|EMBL:CCA91362.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_2705_curated_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10367..10918
DNA (552bp) protein (184aa)
Cytochrome c, class I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCC9_NOVAD
cytochrome c, class I; K08738 cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABD24481.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_2705_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11032..12066)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKH41800.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_2705_curated_12
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12212..12589)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKG9_9SPHN
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
scnpilot_p_inoc_scaffold_2705_curated_13
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12668..13183)
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB37_9SPHN
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_p_inoc_scaffold_2705_curated_14
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13502..13723)
DNA (222bp) protein (74aa)
Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCD3_NOVAD
XRE family transcriptional regulator; K07727 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD24477.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_2705_curated_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13723..14259)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCD4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH43662.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
Displaying 15 items

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