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scnpilot_p_inoc_scaffold_926_curated_14

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(12656..13273)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD04FC similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 184.0
  • Bit_score: 317
  • Evalue 9.70e-84
RNA polymerase sigma70 {ECO:0000313|EMBL:KEO92378.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 318
  • Evalue 7.90e-84
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 202.0
  • Bit_score: 307
  • Evalue 2.40e-81

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAACAAGGGAAGTTCAGACAGCGGCGAACGCAGGGCTGGCGAAGGCTTCAAGCGCGAGCTGACCGCCGTGATCCCCCATCTCCGCGCCTTCGCGCGCGGCTTGTGCGGCCGCCCCGATATGGCGGACGATCTGGTACAGGAAACCCTGCTCAAGGCATGGGCCGCGCGGGAAAGGTTCGAGCCCGGAACATCAATGCGTGCCTGGACCTTCGTGATCTTGCGCAACGCCTATCTCACCGACATGCGCCGTGCGCGCTTTCGCGGCGAATATGACGAAGGGCTGGCCGAGCGAATTCTCACCGCGCCCGCCGATCAGGAAGACCCCATCCATCTGGGAGACCTTCATCGCGCCCTCCAAACCCTGCCCCCCGAACGGCGCGAAGCCTTGTTGCTGGTAGGCGCGGGCGGCTTCTCCTACGAGGAGGCGGCGGAAATCTGCGGCTGCGCCGTAGGCACGATCAAGAGCCGCGTTGGCCGCGCCCGCGCCGCGCTGAGCGCCATGATCGAGGAAGGAAAAATCCCACGCCGCGACATAAGCGACGTGGAGGCCCACCGTGCCATTCTGGACGAGCTGGAACAGGTTTCCGGCGCGGAAGGTTCCACCCCAGCCGATTGA
PROTEIN sequence
Length: 206
MNKGSSDSGERRAGEGFKRELTAVIPHLRAFARGLCGRPDMADDLVQETLLKAWAARERFEPGTSMRAWTFVILRNAYLTDMRRARFRGEYDEGLAERILTAPADQEDPIHLGDLHRALQTLPPERREALLLVGAGGFSYEEAAEICGCAVGTIKSRVGRARAALSAMIEEGKIPRRDISDVEAHRAILDELEQVSGAEGSTPAD*