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scnpilot_p_inoc_scaffold_926_curated_32

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(31972..32178)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB45_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 1.70e-24
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KHS48337.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 68.0
  • Bit_score: 120
  • Evalue 8.10e-25
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 65.0
  • Bit_score: 115
  • Evalue 7.70e-24

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGACTATCGGAACCGTAAAATTCTTCAATGAAGACAAGGGCTATGGCTTTATTCAGCCCGACGATGGCGGCAAGGACAGCTTCGTCCACATTTCCGCCGTTCAGGCTGCCGGCATGGCCACTCTGAACAAGGACCAGCGCGTGTCCTATGAAGTCGAAACCGGCCGTAACGGCAAGGAATCGGCTGTGAATCTGGCCAGCGCCTGA
PROTEIN sequence
Length: 69
MTIGTVKFFNEDKGYGFIQPDDGGKDSFVHISAVQAAGMATLNKDQRVSYEVETGRNGKESAVNLASA*