ggKbase home page

scnpilot_p_inoc_scaffold_1172_curated_4

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 5203..5826

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IUZ3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 195.0
  • Bit_score: 279
  • Evalue 2.30e-72
TetR family transcriptional regulator {ECO:0000313|EMBL:EQB13504.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 195.0
  • Bit_score: 279
  • Evalue 3.20e-72
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 195.0
  • Bit_score: 270
  • Evalue 4.30e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCGACAGTGCCGGACACGTCGTCGGAAGCGAGGGAGCAATTGCTCGCCACAGCTTCTGCGATCATGCGCGAAAGCGACACTGTCGACATTTCCCTGGCCCAGCTTAGCCGCAAGTCGGGGCTGAATTCCGCGCTGGTAAAATATTACTTCGGCAATAAGGCCGGGCTCATGAAAGCTCTGCTGGACCGGGACATGACTAGCATCCTGGCCTCGGTGGGGGCGCTGCTGGCTTCGGAGCATGATCCCGAAACCAAGCTGCGCCGTCATATATGGGCGGTCGTGAACCGCTTTTACGAGGTTCCCTACATTCAGCGCCTGCTGATGCGGCTGATCCGCGAAAGCGAGCCCGTGGAAGCGCAGCGTATCGCAAATGTCTATCTCAGTCCGATCTATGCCGCATATGACAGGCTGATTGGCGAGGGTGTCGAGGCCGGAGTATTCAGGCCGGTCGACCCGCAGCTGTTTTATTTCAGTCTTACTGGCGCGGTAGACCGCTTCTTCGCGGCGCGACTCTTCATGCGTTATTGCTTTGACGATGATGCGCTTTCCGAAGAACTGCGTGACCGGTATCGCACGCATCTTATCGATTTCATCATGGCAGGATTGTTGAGGAACGGATGA
PROTEIN sequence
Length: 208
MATVPDTSSEAREQLLATASAIMRESDTVDISLAQLSRKSGLNSALVKYYFGNKAGLMKALLDRDMTSILASVGALLASEHDPETKLRRHIWAVVNRFYEVPYIQRLLMRLIRESEPVEAQRIANVYLSPIYAAYDRLIGEGVEAGVFRPVDPQLFYFSLTGAVDRFFAARLFMRYCFDDDALSEELRDRYRTHLIDFIMAGLLRNG*