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scnpilot_p_inoc_scaffold_1172_curated_17

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(16818..17267)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 144.0
  • Bit_score: 267
  • Evalue 1.50e-68
ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 144.0
  • Bit_score: 248
  • Evalue 1.60e-63
Ribonuclease H n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y892_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 144.0
  • Bit_score: 267
  • Evalue 1.10e-68

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGGTAACGATGACCAAGGTTGAGATTTTCACTGACGGAGCCTGCAAGGGCAATCCCGGCCCCGGCGGCTGGGGCGCCCTGCTGCGCATGGGGCAGCATGAAAAGGAACTGTCAGGCTCCGAGCCCGAGACTACCAATAACCGCATGGAGATGACGGCGGTTATCCGGGCCCTGAAGGCGCTGACCCGGCCGTGCCAGGTCAATCTCCATACGGACAGCCGCTATGTGATCGACGGCATTACCAAGTGGGTTCACGGCTGGAAACGCAACGGCTGGGTCAATGCCAGCAAAAAGCCCGTACGTAACGCGGAGCTATGGCACGACCTGATCGAAGCCGCTGCCCCCCACAAGATCGAATGGATCTGGGTAAAGGGGCATAACGGGCATCCGGAAAACGAGCGCGTGGACCAATTGGCCAGCGACGCGGCGAACAAGGCGGCAGGACGCTAA
PROTEIN sequence
Length: 150
MVTMTKVEIFTDGACKGNPGPGGWGALLRMGQHEKELSGSEPETTNNRMEMTAVIRALKALTRPCQVNLHTDSRYVIDGITKWVHGWKRNGWVNASKKPVRNAELWHDLIEAAAPHKIEWIWVKGHNGHPENERVDQLASDAANKAAGR*