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scnpilot_p_inoc_scaffold_3652_curated_3

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 626..1585

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 319.0
  • Bit_score: 487
  • Evalue 1.50e-134
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 321.0
  • Bit_score: 438
  • Evalue 2.40e-120
Pseudouridine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3R7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 319.0
  • Bit_score: 487
  • Evalue 1.10e-134

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGGGGCCGAGAACATCATTACCGGCGTGCTGGAAACAGGCGGCGAGCGGCTGGACAAGGCTCTGAGCGCCGCCAGCGGGCTTTCGCGTGAGCGCGTGAAGGCCCTGATCGGCGAAGGCCGCGTCAGCCTTGCCGGGAAAGCCGCCAGCAGCGCCTCCGCCAAACCCGCAGCGGGAACTGCCTGGTCGATCGATGTCCCCCCTGCCGTTGAGGCGAAGGCCCGGCCGCAGGACATTCCGCTGGCCGTGGTGTTCGAGGATGAGCATTTGATCGTGATCGACAAGCCAGCCGGGCTGGTCGTCCACCCCGCCGCCGGCAATCCCGATGGCACGCTGGTCAATGCCCTGCTCCATCACTGCGCCAATAACGGGGGCGGTCAGCTTTCCGGCATTGGCGGAGTCGCCCGGCCGGGCATCGTCCACCGGATCGACAAGGATACCTCCGGCCTGCTGGTCGTGGCCAAGAGCGATGCGGCTCATATCGGCCTTGCCGAACAATTCGCGGATCATTCCATCGAGCGCGCCTATCTGGCCGTGGTCGCAGGGCATCCCCGCCCCCTGTCCGGCACAGTGAACGCGCGGGTCGGACGGTCCGATTCGAACCGCAAGAAGATGGCCGTGCTGGCCGACGATGCCAGCCGGGGCAAACATGCCGTTACCCATTACAAGGTTTTGAAAGAGCTTGATAATTCCGCTTTGGTCGAATGCCGTCTGGAAACGGGCCGCACTCATCAGGTGCGCGTTCACATGGCATCAATCGGCCATGCCCTATTAGGGGATCCTGTCTATGGCCGAACTCCCGCCCCCTTGCGCCCGCTCCTCAAGCGACTCGGTTTCGAGCGGCAGGCACTGCATGCGGCGGTGCTCGGCTTTGAACATCCGGTAACCAGAAAAACTATGCGGTTCGAAAGTGAATTACCGGCAGATATGAGGGAACTTATCGACGAAACCACTCGTTGA
PROTEIN sequence
Length: 320
MGAENIITGVLETGGERLDKALSAASGLSRERVKALIGEGRVSLAGKAASSASAKPAAGTAWSIDVPPAVEAKARPQDIPLAVVFEDEHLIVIDKPAGLVVHPAAGNPDGTLVNALLHHCANNGGGQLSGIGGVARPGIVHRIDKDTSGLLVVAKSDAAHIGLAEQFADHSIERAYLAVVAGHPRPLSGTVNARVGRSDSNRKKMAVLADDASRGKHAVTHYKVLKELDNSALVECRLETGRTHQVRVHMASIGHALLGDPVYGRTPAPLRPLLKRLGFERQALHAAVLGFEHPVTRKTMRFESELPADMRELIDETTR*