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scnpilot_p_inoc_scaffold_1246_curated_15

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 16975..17823

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU41_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 282.0
  • Bit_score: 443
  • Evalue 2.10e-121
binding-protein-dependent transport system inner membrane protein; K11070 spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 282.0
  • Bit_score: 443
  • Evalue 6.60e-122
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABF52831.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 282.0
  • Bit_score: 443
  • Evalue 2.90e-121

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGATCGGGCTCGGCAAGCGCACACCCATCGCGCCGCTGGAATATACCCGCCGCCTGTGGATGCGCGCCTGGGTGGGGCTGGTGCTGTTCTTCCTCTACGCGCCGCTGATCACACTGGTCGCGTTCAGCTTCAACGACAGCCGCCGCAACATCGTGTGGCGCGGCTTCACCTTCAAATATTACGAGAAGGCGCTGAACAACGACAGCCTGATGGAGGCGCTGGTCAATTCCATCACCATCGCCGCCCTCGCCACTGCCGTCAGCGTCGTGCTGGGCGCGCTGGCCGCCGTCATGCTGTGGCGTTTCCGCTTTCCGATGAAGGCGGCGGCGGAAGGCGCGATGGCGCTGCCCATCGTGGTGCCGGAAATATGCATGGGCGTTGCCATGCTTGTATTCTTCGCCAAGATTGGCTTCCCCACGGACCTGCCCTGGCCATTCAATCTCGGCGCGATCACCATCGCGCATATCACCTTCTGCTTCCCCTTCGTGACCATGGTGGTCCGGTCCCGCCTGGCCAGCTTCAACCGCGAGGAAGAGGAAGCCGCCAAAGACCTGGGCGCCAATGAGTGGCAGGCCTTCCGCGACGTCCTGCTACCCCATATGAAACCGGGACTGGTGGCGGGCGCACTGCTGGCCTTCACGCTCAGCCTCGACGATTTCGTGATCACCTTCTTCACTTCGGGGCCCAATACCGTGACTTTCCCGGTCAAGGTCTATTCCATGGTCCGCTTCTCCGTGACGCCGGAGGTCAATGCGGCTTCCGCCATGGTCATCGCCCTTACCGTCATCCTCACCACCATCACGCTCAAGATGCAAAGCCGCATGGGCACGATCGCGCAAGGCCACTGA
PROTEIN sequence
Length: 283
MIGLGKRTPIAPLEYTRRLWMRAWVGLVLFFLYAPLITLVAFSFNDSRRNIVWRGFTFKYYEKALNNDSLMEALVNSITIAALATAVSVVLGALAAVMLWRFRFPMKAAAEGAMALPIVVPEICMGVAMLVFFAKIGFPTDLPWPFNLGAITIAHITFCFPFVTMVVRSRLASFNREEEEAAKDLGANEWQAFRDVLLPHMKPGLVAGALLAFTLSLDDFVITFFTSGPNTVTFPVKVYSMVRFSVTPEVNAASAMVIALTVILTTITLKMQSRMGTIAQGH*