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scnpilot_p_inoc_scaffold_1555_curated_2

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 591..2030

Top 3 Functional Annotations

Value Algorithm Source
TolC-like protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU73_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 485.0
  • Bit_score: 629
  • Evalue 3.50e-177
TolC-like protein {ECO:0000313|EMBL:GAD48914.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 485.0
  • Bit_score: 629
  • Evalue 4.90e-177
Type I secretion outer membrane protein, TolC; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 477.0
  • Bit_score: 600
  • Evalue 5.50e-169

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGCCGGCGGGGGGGAGAAAGCTGGCTTTGCTGGCCGGCGCTGCGGCGCTTCTGTCGCCCGCGCCCGTGCTGGCGGATACGCTGAAGGATGCGCTGCTCGGCGCATATCAGACCAACCCCACCCTGCAGGCAGCTCGGGCAAATCAGCGCGCGACGGATGAAAACGTGCCGATCAACCGCGCCAGCGGCCTTCCCTCGGTCAGCGGCACGGCGACCTATACCGAACAGCTCAAGGAAACGACGCCCGATCCCACCGGTCTCTTCGCGGATCGTAGCCTTGCCGGATCGCTGACGCTTTCGGTGCCGGTCTATTCCGGCGGTTCGGTGCGAAACTCGGTCAACGCAGCCGAAACGCGCGTGAAAGCCGGACAGGCGAGCCTGCGCGCCACTGAAAGCAGCGTGTTCAGCCAGACGGTCACTGCCTATATGGATGTGATCCTCAACGAAGCGATCGTGAGCCTGTCGGCCAACAATGTCGACGTTCTCAGCGTCAACCTCCAGGCCACGAAGGACCGCTTCGAAATCGGCGATCTGACACGCACGGACGTGGCACAGTCCGAATCGCGTCTGGCACTGGCCCAGGGCGATCTGCGGACCGCGCGCGCCAATCTCTCTGCCGCGAGAGAGCGTTATATCCAGATCGTCGGCAAGCCGCCTGAAAATCTGGAAGCGCCCCCGCCTTTGCCGGGCCTTCCGGGCAGTCCGCAAGAAGCCGTTACAATCGCTCTTGATAACAATCCGGACCTGATCGCCGCGCGCGATGCGTCGAACGCCGCACGCTATGACATTGAGGTTGCGGGCGCAGGACGTCTGCCCAAGCTGGAGGTGTTCACTTCCGGCACCTATAGCGATCCGCTCGGTACCGTCACCAATGGCACCAGCGCGACGGGCGCCTCTGCGGGCGTGCGAGCCACGATCCCCCTGTTTCAGGGCGGTCGGCCCGCAGCACAGGAACGACAGGCTCAGGCACGATCCGCTGCTGCGCTGGAGCAGGAAATCGGCACCGAACGCGGCGTAATCTCACAGGTGCGCGCCGCCTTTTCGAGCCTGGAGGCCGCCAATTCCATCATCGCTTCAACTCAGACTGCCGTCAGCGCGGCAGAATTGAGCCTTGAAGGCGTGCGCGCGGAAAACACGGTCGGTAACCGCACCATCCTAGAAATCCTCAATGCCGAGCAGGAACTGCTCAGCGCCCGCGTCCAGCTGGTCACTGCCCGGCGCAATGCCTATGTCGCCGGCTTCACTCTGCTGGCCGCCATTGGTCGCGCCGAGGCGCGCGATCTGGGCCTGGGTGACGAAGGTGTGCTCTACGATCCGCAGGTCAATTATGACCGGGTAAAGGGTAAAATCTGGGACTGGTCGTTCGATCCCGATCCGGTCGCACAGTCAACGCGGACCGTTGACACGCCGACGCAGGACGGCGAAATTCCGAAACAATAG
PROTEIN sequence
Length: 480
MPAGGRKLALLAGAAALLSPAPVLADTLKDALLGAYQTNPTLQAARANQRATDENVPINRASGLPSVSGTATYTEQLKETTPDPTGLFADRSLAGSLTLSVPVYSGGSVRNSVNAAETRVKAGQASLRATESSVFSQTVTAYMDVILNEAIVSLSANNVDVLSVNLQATKDRFEIGDLTRTDVAQSESRLALAQGDLRTARANLSAARERYIQIVGKPPENLEAPPPLPGLPGSPQEAVTIALDNNPDLIAARDASNAARYDIEVAGAGRLPKLEVFTSGTYSDPLGTVTNGTSATGASAGVRATIPLFQGGRPAAQERQAQARSAAALEQEIGTERGVISQVRAAFSSLEAANSIIASTQTAVSAAELSLEGVRAENTVGNRTILEILNAEQELLSARVQLVTARRNAYVAGFTLLAAIGRAEARDLGLGDEGVLYDPQVNYDRVKGKIWDWSFDPDPVAQSTRTVDTPTQDGEIPKQ*