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scnpilot_p_inoc_scaffold_1555_curated_16

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(9241..10110)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 283.0
  • Bit_score: 464
  • Evalue 9.70e-128
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 283.0
  • Bit_score: 431
  • Evalue 2.00e-118
Shikimate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU84_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 283.0
  • Bit_score: 464
  • Evalue 6.90e-128

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGACCCGCCCTTATGCTGAAGTAATCGGCGATCCCATCGCCCAGTCGAAATCCCCGGCAATCCACGGCTACTGGATCGAACAGTTGGGATTGGACGCGGATTATCGCGCGGTACACGTAACCTCCAGCGGACTTGAGGATTACCTGAAATCCCGCCGCGAGGATCCGCAATGGCGGGGTTGTAACGTGACCATGCCGCACAAGCAGGCGGTAATCCCCTTGCTTGATCGCCTTGATCCTCTGGCGACGCGGATCGGTGCCGTGAACACCATCGTGCGGGAGCCTGACGGATCGCTTTCCGGCTACAATACCGATGCTGGCGGGTTCCTTGAACCGCTGCGGCCCGTGCTCGCCAAAGAGCATCTGTTCCGCATGGCGCGAGTGTTGGGTACAGGGGGGGCAGCTCGAGCGATCATCGCCGCATTAGCGCAAGAGCACGTAGTGATCGTCCTGGCCGGCCGCGATCCCGAAAAGGCGCGTGCCCTGCTGGACGAACTGGACCCCAAGGGTGAGCATCATGTTGCTCCGCTTGCCCATTTTGCGGAGCCGACCGATTTCGAGTTTGACGATCGCGCCGGATGCTTCGACCTGGTGGTGAATGCCAGCCCACTGGGCATGGCGGGCCAGCCCCCGCTCGAGTTCGATTTCAGCCATGTGCCCCCCGGCAGCATCATCTACGACATCGTTACTCACCCGGTGGAAACGCCCTTGCTCAAGGCGGCAAGCGCTGCCGGCTATAGGACGGTGGACGGGCTTTCCATGCTGATCGGACAGGCGGCGGAGGCTTTTGAACGGTTCTTTGGCCAGGCGCCTCTGCGGGATGACGGGGACGCTGAACTTCGTGCGCGCCTGACTGGCGGGCAGGCGTGA
PROTEIN sequence
Length: 290
MTRPYAEVIGDPIAQSKSPAIHGYWIEQLGLDADYRAVHVTSSGLEDYLKSRREDPQWRGCNVTMPHKQAVIPLLDRLDPLATRIGAVNTIVREPDGSLSGYNTDAGGFLEPLRPVLAKEHLFRMARVLGTGGAARAIIAALAQEHVVIVLAGRDPEKARALLDELDPKGEHHVAPLAHFAEPTDFEFDDRAGCFDLVVNASPLGMAGQPPLEFDFSHVPPGSIIYDIVTHPVETPLLKAASAAGYRTVDGLSMLIGQAAEAFERFFGQAPLRDDGDAELRARLTGGQA*