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scnpilot_p_inoc_scaffold_1343_curated_1

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3..2057)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 689.0
  • Bit_score: 1087
  • Evalue 0.0
DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 708.0
  • Bit_score: 1030
  • Evalue 0.0
NAD-dependent DNA ligase LigA n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6C14B similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 687.0
  • Bit_score: 1099
  • Evalue 0.0

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2055
GTGAGTGCTGACCTCACCGAAGCCGAGGCCGCCAACGAATTGATGCGGCTGGCCAAGGCAATTGCGCATCATAACCGGCTGTATCACGCAGAGGATTCGCCCGAGATTTCGGACGCGGAGTTCGATGCGCTGATCCGCCGCAACAATGAGCTTGAGGCGGCATTTCCTCACCTTATCCGGTCGGACAGCCCATCGCGTCTGGTCGGTTCGGCAGTGGCATCTTCGCCGCTGGCAAAGGTGCGGCATGAAGTGCGCCTGTTCAGCCTCGACAATGCCTTTTCCAATGAGGAATTGGAGGAATTCGTCGCCCGCGTCCGCCGCTTCCTCAATTTCCCTGCCGATGAGCAGCTGGAACTGACGGCGGAAGACAAGATCGACGGGCTTTCCTGCTCGCTGCGCTACGAGGAAGGCCGCCTCGTGCGCGCCGCCACGCGCGGCGACGGCGAGGTGGGGGAGGATGTTACCGCCAATGTCCGCCACATTGCAGACATCCCAGAGGTGCTTCACGGCACCGCGCCCGCCGTGTTCGAGATACGCGGCGAGGTCTATATGGAAAAGCAGGCCTTCGCCGCGCTCAATGCCGCGCAGGAGGAGGCTGGCGGGAAGATTTTCGCCAATCCGCGCAATGCTGCGGCTGGCTCGCTGCGGCAGAAGGACGCCAGCGTCACTGCAAAGCGTCCCTTGCGCTTCCTCGCCTGGGGCTGGGGCGATGCGAGCGAGGTTCCGGGCGATACGCAGTGGCAAGTGATGCAGCAGATCGCCGCATGGGGGCTGCCGGTCTCCCCCTTGCTGGGACGGCACAGCGACATGGCCGAATTGCTGCAGCATTATCGCCGGATCGAGGCCGAGCGGGCGGAACTGCCCTATGACATCGATGGCGTGGTCTATAAGGTCAATCGGCTGGATCTGCAGCAACGGCTGGGCTTCGTGGCCAAGGCGCCGCGCTGGGCAATTGCGCGCAAGTTTCCCGCCGAGCAGGCCCAGACCACACTGGAAGCCATAGACATTCAGGTCGGCCGTACCGGCAAGCTGACGCCGGTTGGGCGGCTCACTCCCGTTACAGTGGGCGGGGTCGTCGTCTCCAACGTCACGCTCCACAATCGGGACGAGATCGCGCGGCTGGGTGTACGGCCGGGCGACCGGGTGGTGATCCAGCGGGCAGGGGATGTGATCCCGCAGGTTGTGGAAAACCTCACTCGCGACGAACCGCGCGAGCCCTATCATTTCCCCGATCACTGCCCGGAATGCGGCAGCGAGGCCCTGGCGGAAGAAGGCGAAGTGGATGTGCGCTGCACGGGCGGCCTGATCTGCCCGGCCCAGCGCACCGAACGCCTCAAGCACTTCGTCAGCCGCGCCGCGCTGGATATCGACGGGCTGGGCGAGAAGACGATCGATGAATTCTTCGCGCTTGGCTGGCTGGAAAGCCCGGCGGATATCTTCCGCCTACGCAAGCGCCGCAGCGAGATTGTCGGGCGCGAAGGCTGGCAGGACAAGTCTGTGGACAATCTGTTGGCTGCGGTGGAAAATCGCCGCTCGCCCGATGCCGCGCGCCTGCTGTTCGGCCTCGGCATCCGCCATGTCGGCGCGGTGACGGCGCGGGACCTGCTAAAGCGTTTCGTCACGCTTCCCGCCCTGCGGGAGGCGGCGGAAAAGGCCTATGCCGGTGACGAGGACGCAAAGGCCGAATTGCTTTCCATCGACGGGGTAGGCCCCGTGGTGGTGGAAGCGCTGGGCGAGTTCTTCCACGAACCGCACAATCGCGACGTGTGGGACGATCTGCTGAGCGAGCTTTCACCGCCCGATTATGTGGTGGAAACGAAGGATTCCGCAGTGTCTGGCAAGACGGTGGTATTTACCGGCAAGCTGGAAACCATGAGCCGTGACGAGGCCAAGGCGCAGGCCGAGCGTCTGGGCGCACGCGCTGCCGGATCGGTGAGCGCCAAGACGGACCTTCTGGTCTATGGTCCGGGTGCGGGATCGAAGCTGAAAAAGGCGGCCGAACTGGGGATCGAGGCAATCGATGAAGCCGCCTGGGCCGAGATTGTGAAGGCGGCG
PROTEIN sequence
Length: 685
VSADLTEAEAANELMRLAKAIAHHNRLYHAEDSPEISDAEFDALIRRNNELEAAFPHLIRSDSPSRLVGSAVASSPLAKVRHEVRLFSLDNAFSNEELEEFVARVRRFLNFPADEQLELTAEDKIDGLSCSLRYEEGRLVRAATRGDGEVGEDVTANVRHIADIPEVLHGTAPAVFEIRGEVYMEKQAFAALNAAQEEAGGKIFANPRNAAAGSLRQKDASVTAKRPLRFLAWGWGDASEVPGDTQWQVMQQIAAWGLPVSPLLGRHSDMAELLQHYRRIEAERAELPYDIDGVVYKVNRLDLQQRLGFVAKAPRWAIARKFPAEQAQTTLEAIDIQVGRTGKLTPVGRLTPVTVGGVVVSNVTLHNRDEIARLGVRPGDRVVIQRAGDVIPQVVENLTRDEPREPYHFPDHCPECGSEALAEEGEVDVRCTGGLICPAQRTERLKHFVSRAALDIDGLGEKTIDEFFALGWLESPADIFRLRKRRSEIVGREGWQDKSVDNLLAAVENRRSPDAARLLFGLGIRHVGAVTARDLLKRFVTLPALREAAEKAYAGDEDAKAELLSIDGVGPVVVEALGEFFHEPHNRDVWDDLLSELSPPDYVVETKDSAVSGKTVVFTGKLETMSRDEAKAQAERLGARAAGSVSAKTDLLVYGPGAGSKLKKAAELGIEAIDEAAWAEIVKAA