name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_1343_curated_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..2057)
|
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
NAD-dependent DNA ligase LigA n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6C14B
|
|
scnpilot_p_inoc_scaffold_1343_curated_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2054..2449)
|
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74C62
Uncharacterized protein {ECO:0000313|EMBL:AJR22944.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1343_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2561..4234)
|
DNA repair protein RecN n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZT8_9SPHN
DNA repair protein RecN {ECO:0000313|EMBL:AKH41319.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ATPase; K03631 DNA repair protein RecN (Recombination protein N)
|
|
scnpilot_p_inoc_scaffold_1343_curated_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4317..4964)
|
Outer membrane protein assembly factor BamD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7K1_NOVAD
DNA uptake lipoprotein; K05807 putative lipoprotein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
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scnpilot_p_inoc_scaffold_1343_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5035..5958)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G554_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH41314.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1343_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6082..6714
|
Putative transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7M3_NOVAD
TetR family regulatory protein {ECO:0000313|EMBL:AKH41313.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TetR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_1343_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6711..7736
|
Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN {ECO:0000313|EMBL:AKH41312.1}; EC=2.1.1.- {ECO:0000313|EMBL:AKH41312.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
O-methyltransferase family 2 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZB0_DESFR
O-methyltransferase
|
|
scnpilot_p_inoc_scaffold_1343_curated_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7805..9622)
|
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Elongation factor 4 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIT1_9SPHN
GTP-binding protein LepA; K03596 GTP-binding protein LepA
|
|
scnpilot_p_inoc_scaffold_1343_curated_9
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9671..11890)
|
Sensory box/GGDEF family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9U4_ERYLH
sensory box/GGDEF family protein
Sensory box/GGDEF family protein {ECO:0000313|EMBL:ABC63547.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
|
|
scnpilot_p_inoc_scaffold_1343_curated_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12021..14732)
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8E4_NOVAD
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABD25879.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
scnpilot_p_inoc_scaffold_1343_curated_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14959..16275
|
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8E6_NOVAD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABD25877.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
scnpilot_p_inoc_scaffold_1343_curated_12
unknown
|
Not on your lists |
comp(16313..16702)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1343_curated_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16702..17829)
|
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
DNA polymerase III subunit beta n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0761
|
|
scnpilot_p_inoc_scaffold_1343_curated_14
unknown
|
Not on your lists |
comp(17988..18521)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1343_curated_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18571..19323)
|
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:KHS45812.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KHS45812.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F1_NOVAD
|
|
scnpilot_p_inoc_scaffold_1343_curated_16
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19374..19772)
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GPW7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL24823.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1343_curated_17
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19808..20743)
|
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJB7_9SPHN
|
|
scnpilot_p_inoc_scaffold_1343_curated_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20783..21607)
|
Putative murein peptide carboxypeptidase {ECO:0000313|EMBL:AKH41301.1}; EC=3.4.16.- {ECO:0000313|EMBL:AKH41301.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Putative LD-carboxypeptidase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0I2_9SPHN
|
|
scnpilot_p_inoc_scaffold_1343_curated_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21667..23139
|
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZSD4_9SPHN
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:GAD48274.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
|
|
scnpilot_p_inoc_scaffold_1343_curated_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23255..23767)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41394.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1343_curated_21
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24191..24601
|
30S ribosomal protein S6 n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7B2
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
|
|
scnpilot_p_inoc_scaffold_1343_curated_22
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24601..24825
|
30S ribosomal protein S18 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIU3_9SPHN
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
|
|
scnpilot_p_inoc_scaffold_1343_curated_23
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24839..25447
|
50S ribosomal protein L9 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y570_9SPHN
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
|
|
scnpilot_p_inoc_scaffold_1343_curated_24
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25555..26136)
|
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
|
|
scnpilot_p_inoc_scaffold_1343_curated_25
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26314..26652)
|
Uncharacterized protein n=1 Tax=Klebsiella variicola CAG:634 RepID=R5X720_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDA00337.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
|
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scnpilot_p_inoc_scaffold_1343_curated_26
unknown
|
Not on your lists |
comp(26966..27673)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1343_curated_27
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27719..28651)
|
ribosomal protein S6 modification protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4DCB0
Ribosomal protein S6 modification protein {ECO:0000313|EMBL:AKH41295.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
rimK; ribosomal protein S6 modification protein RimK
|
|
scnpilot_p_inoc_scaffold_1343_curated_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28641..29105)
|
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P860_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41294.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1343_curated_29
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29237..31090)
|
peptidyl-dipeptidase A; K01283 peptidyl-dipeptidase A [EC:3.4.15.1]
Peptidyl-dipeptidase A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG07_9SPHN
Angiotensin-converting enzyme {ECO:0000313|EMBL:AKH41293.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
|
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scnpilot_p_inoc_scaffold_1343_curated_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31159..31917)
|
Arylesterase {ECO:0000313|EMBL:AKH41292.1}; EC=3.1.1.2 {ECO:0000313|EMBL:AKH41292.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Alpha/beta hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8G8_NOVAD
alpha/beta hydrolase
|