ggKbase home page

scnpilot_p_inoc_scaffold_1343_curated_22

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 24601..24825

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIU3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 74.0
  • Bit_score: 143
  • Evalue 1.20e-31
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 74.0
  • Bit_score: 143
  • Evalue 1.70e-31
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 74.0
  • Bit_score: 141
  • Evalue 8.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGCCCGTCCGTTTTTCCGTCGCCGCAAGAGCTGCCCGTTCTCGGCCAAGAATGCGCCGAAGATCGACTATAAGGACGTGCGCCTGTTGCAGGGCTTCATGTCCGAGCGCGGCAAGATCGTGCCGAGCCGCATCACTGCCGTTTCCGCCAAGAAGCAGCGTGAACTGTCGACCGCGATCAAGCGCGCCCGCCAGATCGGCCTTCTGCCGTACATCGTGAAGTAA
PROTEIN sequence
Length: 75
MARPFFRRRKSCPFSAKNAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELSTAIKRARQIGLLPYIVK*