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scnpilot_p_inoc_scaffold_1343_curated_13

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(16702..17829)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 375.0
  • Bit_score: 656
  • Evalue 2.20e-185
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 375.0
  • Bit_score: 647
  • Evalue 2.30e-183
DNA polymerase III subunit beta n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0761 similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 375.0
  • Bit_score: 649
  • Evalue 2.60e-183

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGAAGGCAACCATCGAACGTGCGACGCTGCTGCGCTGCCTGTCCCATGTCCAGTCGGTGGTGGAACGGCGCAACACGATCCCGATCCTGTCGAATGTCCTGATTGACGCATCCGCCGATGGCGCGGTGCGGATCATGGCGACTGACCTTGATCTCCAGGTGGTGGAGAGCATGGCCGCCGTTTCGGTTGAAACGCCGGGTGCGCTCACCGTTTCGGCGCATCTGCTGTTCGACATCGCCCGCAAGCTGCCGGAAGGCAGCCAGGTAGGGCTCGAAGCTGCGGATAATCGCCTCACCGTCAAGGCCGGGCGCAGCCGCTTCCAGCTGCCGACGCTGCCGCGCGACGATTTCCCCGTGATTGTTGAAGGCGATCTGCCGACCAGCTTCGAACTGCCCGCCCGCGTGCTGGCCGAACTGATCGACAAGACCCGCTTCGCCATCTCGACCGAGGAAACCCGCTATTATCTCAACGGCATTTTCCTGCATGTCTCGGATGACGGGCAGCCGCTGCTGAAGGCTGCCGCCACGGATGGCCATCGCCTTGCCCGCTATACGCTGGCCCGCCCGGAAGGGGCGGAAGGCATGCCCGACGTGATCGTGCCGCGAAAGGCCGTGGGCGAATTGCGCAAGCTGTTGGACGAAGCGCTGGACAGCAATGTCGAGATCGATCTTTCCGCCAGCAAGATCCGCTTCACTCTGGGCGGTGAAGGCGGCGTGGTGCTGACCAGCAAGCTGATCGACGGCACTTTCCCCGATTACAGCCGCGTCATCCCCACGGGGAATGACAAGCTGCTGAAGCTCGATCCCAAGAGCTTCTTCGAAGGCGTGGACCGTGTGGCCACCATCGCCACGGAAAAGACCCGCGCGGTCAAGATGGGGCTGGAGCAGGATCGCGTGGTCCTGTCCGTCACTTCGCCCGATAACGGCACGGCGGCGGAAGAGGTCCCTGCGGCCTATTCGGCGGAGGGCTTCGAAATCGGCTTCAACGCCAATTATCTGAAGGACATCCTGCACCAGATCGAAGGCGATTCGGTGGAACTCCACCTTGCCGATCCCGGCGCGCCGACCCTGATCCGCCAGGATGACAAGAGCCCGGCGCTTTACGTCCTTATGCCGATGCGCGTCTGA
PROTEIN sequence
Length: 376
MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIDASADGAVRIMATDLDLQVVESMAAVSVETPGALTVSAHLLFDIARKLPEGSQVGLEAADNRLTVKAGRSRFQLPTLPRDDFPVIVEGDLPTSFELPARVLAELIDKTRFAISTEETRYYLNGIFLHVSDDGQPLLKAAATDGHRLARYTLARPEGAEGMPDVIVPRKAVGELRKLLDEALDSNVEIDLSASKIRFTLGGEGGVVLTSKLIDGTFPDYSRVIPTGNDKLLKLDPKSFFEGVDRVATIATEKTRAVKMGLEQDRVVLSVTSPDNGTAAEEVPAAYSAEGFEIGFNANYLKDILHQIEGDSVELHLADPGAPTLIRQDDKSPALYVLMPMRV*