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scnpilot_p_inoc_scaffold_967_curated_2

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 719..1162

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 145.0
  • Bit_score: 242
  • Evalue 1.20e-61
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 145.0
  • Bit_score: 242
  • Evalue 5.20e-61
Pseudouridine synthase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHS2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 145.0
  • Bit_score: 242
  • Evalue 3.70e-61

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCCCATCGGGCGTCTGGACCTCAATACCGAGGGGCTGCTGCTGCTGACCAATGACGGGGAGTTGAAGCGCGCGATGGAACTGCCCGCCAACGGCATTCCGCGCACCTATCGCGCCCGCGCCTTTGGCGACATTTCGCAGGCGGAACTGGAAACGCTGATCGAAGGCGTGACCATCGATGGCGTGAATTACGGCCGGATCGACGCCAATCTGGAGCGGCGGACCGGCCGCAACCAGTGGATCGAAATGACCCTGACCGAAGGCAAGAACCGCGAAGTACGCCGCGTGCTGGAACATCTCGGCCTCAAGGTCAGCCGCCTGATGCGCCTTTCCTACGGGCCCTTCGCGCTGGGCGACCTGCCGCGCGGCCAGGCCAGCGAAGTACGCCAGAAGGATCTGGAGCAATTCCGCCGCCACATCGCCACGCGTGGGGGCTGGCGATGA
PROTEIN sequence
Length: 148
MPIGRLDLNTEGLLLLTNDGELKRAMELPANGIPRTYRARAFGDISQAELETLIEGVTIDGVNYGRIDANLERRTGRNQWIEMTLTEGKNREVRRVLEHLGLKVSRLMRLSYGPFALGDLPRGQASEVRQKDLEQFRRHIATRGGWR*